Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3593 |
Symbol | |
ID | 6088752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3960193 |
End bp | 3961332 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598677 |
Product | chaperone protein DnaJ |
Protein accession | YP_001722313 |
Protein GI | 170025808 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00197721 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAAGA GAGATTATTA CGAGGTTTTA GGCGTCAGCA GGGACGCCGA AGAGCGTGAA ATCAAAAAAG CCTATAAACG CCTGGCAATG AAATTCCATC CGGATCGTCA ATCGGAGGAT AAAAACGCCG AAGAGAAGTT TAAAGAAGCC AAAGAAGCCT ATGAAATTCT GACCGACGCA CAAAAGCGTG CGGCATATGA TCAATACGGC CATGCAGCCT TTGAACAAGG TGGAATGGGA GGCGGCGGTT TCGGTGGCGG CGGCGGTGGT GCTGATTTTT CCGATATCTT CGGTGATGTT TTTGGTGACA TTTTTGGTGG TGGCCGGCGT CAGCAGCGTG CATCCCGTGG TTCAGATCTA CGTTACAACA TGGATCTGAC ACTGGAAGAA GCTGTGCGTG GTGTAACCAA AGAGATCCGA ATCCCAACGC TGGATGAATG TGATGTTTGC CACGGTAGCG GTGCTAAACC GGGGAGTTCA CCAGTCACTT GCCCAACTTG CCATGGGGCA GGTCAGGTAC AGATGCGCCA GGGGTTCTTT ACCGTACAAC AGGCATGTCC TCATTGTCAT GGACGTGGTC AAATCATTAA AGACCCATGC AACAAGTGTC ATGGACATGG TCGTGTTGAG AAATCGAAAA CGCTGTCGGT CAAAATTCCG GCGGGTGTTG ATACCGGTGA TCGCATTCGC TTAAGTGGTG AAGGCGAGGC GGGTGAGCAT GGTGCACCGT CAGGTGATTT GTACGTTCAG GTACAAGTCA AGGCGCATCC AATCTTCGAG CGCGAAGGCA ACAATCTGTA TTGTGAGGTT CCTATTAACT TTGCAATGGC GGCATTGGGC GGCGAAATCG AAGTCCCTAC ATTGGATGGG CGGGTTAAGT TAAAAATCCC TGCTGAAACC CAAACAGGTA AAATGTTCCG CATGCGTGGC AAAGGCGTTA AGTCTGTTCG TGGTGGTAGC CAAGGCGATT TGTTATGCCG TGTTGTGGTT GAAACGCCGG TTAGCCTGAG CGAAAAACAA AAACAACTGC TGCGTGAGCT GGAAGAGAGC TTTGTCGGTG CTGCTGGTGA AAAAAATAGC CCGCGAGCTA AAAGTTTCTT AGATGGCGTT AAAAAATTCT TTGACGACCT GACACGCTAA
|
Protein sequence | MAKRDYYEVL GVSRDAEERE IKKAYKRLAM KFHPDRQSED KNAEEKFKEA KEAYEILTDA QKRAAYDQYG HAAFEQGGMG GGGFGGGGGG ADFSDIFGDV FGDIFGGGRR QQRASRGSDL RYNMDLTLEE AVRGVTKEIR IPTLDECDVC HGSGAKPGSS PVTCPTCHGA GQVQMRQGFF TVQQACPHCH GRGQIIKDPC NKCHGHGRVE KSKTLSVKIP AGVDTGDRIR LSGEGEAGEH GAPSGDLYVQ VQVKAHPIFE REGNNLYCEV PINFAMAALG GEIEVPTLDG RVKLKIPAET QTGKMFRMRG KGVKSVRGGS QGDLLCRVVV ETPVSLSEKQ KQLLRELEES FVGAAGEKNS PRAKSFLDGV KKFFDDLTR
|
| |