| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3587 |
|---|
| Symbol | lspA |
|---|
| ID | 6090185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3952633 |
|---|
| End bp | 3953142 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641598671 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_001722307 |
|---|
| Protein GI | 170025802 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC CTATTTGCTC GACCGGATTG CGCTGGTTAT GGCTGGCAGT TGTCGTTGTC
ATCTTGGATA TCAGCAGCAA GCAGTGGGTC ATGGCCCACT TTGCTCTGTA TGAATCGGTG
CCACTGATTC CTTTTTTCAA CCTAACCTAT GCGCAGAATT TTGGCGCAGC ATTTAGCTTC
TTGGCGGATA AAAGTGGTTG GCAGCGTTGG TTCTTTGCCG GTATTGCGAT AGGCATCTCC
GTTGTACTGA TGGTGATGAT GTATCGCTCA ACAGCAAAGC AACGCCTAAT AAATTGTGCT
TATGCATTAA TTATCGGTGG TGCACTCGGG AATTTATATG ACCGTTTAGT GCATGGCGCA
GTCAACGATT TTCTCGATTT TTACATCAAT AACTGGCATT TCCCGACGTT CAATTTGGCC
GATGTGGCGA TATGCATTGG CGCTGCGTTG GTTATTTTTG AAGGCTTCTT AAGTCCGGTA
GAAAAAAACG CGGTGAATAA CGATGAGTGA
|
|---|
| Protein sequence | MNKPICSTGL RWLWLAVVVV ILDISSKQWV MAHFALYESV PLIPFFNLTY AQNFGAAFSF
LADKSGWQRW FFAGIAIGIS VVLMVMMYRS TAKQRLINCA YALIIGGALG NLYDRLVHGA
VNDFLDFYIN NWHFPTFNLA DVAICIGAAL VIFEGFLSPV EKNAVNNDE
|
|---|
| |