Gene YPK_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3580 
Symbol 
ID6090299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3942843 
End bp3943643 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content50% 
IMG OID641598664 
Producthypothetical protein 
Protein accessionYP_001722300 
Protein GI170025795 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGG AGAATGTAAT AAACAGTGAT GTGCCGCATC ATCAGCAGCG AGATATTACT 
CGGTTATGTA TCAAATGTGC CCTATTGCTG TTGCAACATG GCGCAGAAAG TATGCTGGTT
GAGCAGTTAT CGGCGCGTCT TGGTATGGCT CTGGGTATGG ATAGCGTTGA AAGTTCTATC
TCGGCCAATG CGGTGGTGTT AACCACCATT AGCCAGGGAA ATTGCCTGAC ATCAACCCGC
AAGAATACGG ATCGTGGCAT TAATATGCAG GTAGTCACTG AGGTCCAGCA TATTGTGATC
CTCGCAGAGC ACCGTTTGCT GGATGCGAAA GACGTAGAAA AACGCTTTGA AAATATTAAA
CCTCTGCGTT ACCCGCGCTG GCTGGTGGTT ATCATGGTGG CGCTCTCCTG CGGTTGTTTC
AGTAAATTGA ACGGCGGCGG TTGGGATGCC TTCTCTATCA GCTTTGTGGC CAGTGGGCTG
GCGATGTTTG TACGCCAAAG CCTGACGGCC CGCCATATGA ATCCATTAAT TAATTTCTGT
ATTACCGCTT TTGTGGCGAC ATCTGCCTCC GGTTTATTAA TGCGTTTACC ATTTTTCGAG
CAGGCCTCCA GTGTGGCGAT GGCGGCCAGT GTATTGTTAT TGGTTCCGGG TTTCCCGCTG
ATTAATGCGG TGGCAGATAT GTTTAAAGGG CATGTTAATA CGGGGCTGGC GCGTTGGGCG
ATGGCCAGCT TGCTGACCTT ATCAACCTGT ATTGGAGTGG TGTTCGCGAT GGCACTTTGG
GGTTTGCGGG GGTGGGCGTG A
 
Protein sequence
MSLENVINSD VPHHQQRDIT RLCIKCALLL LQHGAESMLV EQLSARLGMA LGMDSVESSI 
SANAVVLTTI SQGNCLTSTR KNTDRGINMQ VVTEVQHIVI LAEHRLLDAK DVEKRFENIK
PLRYPRWLVV IMVALSCGCF SKLNGGGWDA FSISFVASGL AMFVRQSLTA RHMNPLINFC
ITAFVATSAS GLLMRLPFFE QASSVAMAAS VLLLVPGFPL INAVADMFKG HVNTGLARWA
MASLLTLSTC IGVVFAMALW GLRGWA