Gene YPK_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3575 
SymbolapaH 
ID6090186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3939487 
End bp3940356 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content48% 
IMG OID641598659 
Productdiadenosine tetraphosphatase 
Protein accessionYP_001722295 
Protein GI170025790 
COG category[T] Signal transduction mechanisms 
COG ID[COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 
TIGRFAM ID[TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACTT ATCTTATTGG TGATATTCAT GGCTGCCTCG ATGAATTACT TGCGCTTTTA 
GCCCAGGTGA ACTTCGATCC ACAGCAGGAT ACTTTATGGC TGACGGGCGA TTTAGTTGCC
CGTGGTCCCG CTTCATTGGA TGTTTTACGT TATGTACGTT CGTTAGGACC CGCAGTTCGT
ATGGTGCTGG GTAACCATGA CCTGCATTTA CTGGCAGTCT ACGCAGGCAT CAGCCGTAAT
AAACCAAAAG ATCGTATTAC CCCACTGCTG GATGCACCCG ATGCTGATGA GCTAATTAAT
TGGCTACGTC GCCAACCCGT TTTGCAGGTT GATGACCAGC TTAAATTGAT TATGGCCCAC
GCAGGCATCA CACCACAGTG GGATATTGAA ACAGCCCAAA TGTGTGCGCG AGAAGTTGAA
GCGGTATTGA GCAGCGACAG TTATCCGCTA TTTTTGGATG CGATGTACGG TGATATGCCA
AACAACTGGT CACCAGAGCT TACCGGGCTG GCACGTTTGC GCTTTAGTAC CAATGCACTT
ACGCGGATGC GCTTTTGCTT CCCGAATGGC CAACTTGATA TGATCTGCAA AGACACGCCA
GAAAACGCGC CAGCCCCTCT CAAACCTTGG TTTGACCTAC CAAGGCTCGT TGACCCTGAA
TATTCAATTA TTTTTGGTCA TTGGGCATCA TTGGAAGGTA AAGGTGTACC AGAGGGGATA
TATGGACTGG ACACTGGCTG TTGCTGGGGA GGGGATTTAA CCCTACTTCG TTGGGAAGAT
AAACGTTATT TCACACAGCG CGCCTTCAAA GCCGAAGCTG AAATTAATAA TAACAATGGA
TTTGCAGCAG GCGAAGAAGT ACAACACTAA
 
Protein sequence
MSTYLIGDIH GCLDELLALL AQVNFDPQQD TLWLTGDLVA RGPASLDVLR YVRSLGPAVR 
MVLGNHDLHL LAVYAGISRN KPKDRITPLL DAPDADELIN WLRRQPVLQV DDQLKLIMAH
AGITPQWDIE TAQMCAREVE AVLSSDSYPL FLDAMYGDMP NNWSPELTGL ARLRFSTNAL
TRMRFCFPNG QLDMICKDTP ENAPAPLKPW FDLPRLVDPE YSIIFGHWAS LEGKGVPEGI
YGLDTGCCWG GDLTLLRWED KRYFTQRAFK AEAEINNNNG FAAGEEVQH