Gene YPK_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3570 
Symbol 
ID6090021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3933665 
End bp3935917 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content48% 
IMG OID641598654 
Productorganic solvent tolerance protein 
Protein accessionYP_001722290 
Protein GI170025785 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000108275 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGGTG TCCCAACCTA TGATCAACCA CTGGTCACAG GCGATCCGAA TCAACTGCCG 
GTCCGTATTA ATGCGGATAA AACCGAAGCA AACTATCCGG ATAATGCCTT GTTTACTGGC
AATGTTATTG TTCAGCAAGG CAATAGCACC CTAACAGCGA ACCAAGTGGA ACTGACACAG
GTACAGAAAC CCGGTGAAGT CATTCCCCTT CGTACCGTTA CCGCCACCGG CGATGTCAAC
TACGACGATC CGCAAATCAA GCTGAAAGGA CCAAAAGGTT GGTCAAATCT GAACACCAAA
GATACTGATA TAGACAAAGG TAAATATCAG ATGGTGGGCC GTCAGGGCCG TGGTGATGCA
GATTTGATGA AATTGCGCGA TCAGAGCCGC TACACCATTT TGAAAAACGG CACATTTACC
TCTTGCCTAC CCGGAGATAA CAGTTGGAGC GTGGTTGGCT CAGAGGTCAT TCATGACCGC
GAAGAACAAG TGGTTGAAGT TTGGAATGCT CGTTTCAAGA TTGGCAAAGT CCCGGTGTTT
TACAGCCCTT ATATGCAATT GCCAGTTGGC GATAAACGCC GTTCGGGGTT CTTGATCCCA
AATGCGAAAT TTACCAGTAA CAATGGTTTT GAGTTTTTAC TCCCTTATTA CTGGAATATT
GCCCCCAACT TTGATGCCAC CATTACGCCA CACTATATGG AAAGGCGCGG GTTGCAATGG
CAAAACGAAT TCCGCTATTT GCTGGCGCCG GGTTCAGGCA CCATGGCATT AGACTGGTTG
CCCAATGACC GTATCTATAC GGGGCCTGAT GGCACAGATA AAAATGCCAC CCGCTGGCTA
TACTACTGGG GCCATTCCGG TGTAATGGAT CAAGTTTGGC GCTTCAACAT CAACTATACC
CGTGTCAGCG ACCCCGCTTA CTTTACGGAT TTAACCTCTC AGTACGGTTC GACAACCGAT
GGCTACGCGA CACAAATATT CACCGCCGGT TATGCCAATG AAAACTGGAA TGCGACGCTG
TCTTCCAAGC AGTTCCAGGT ATTTACTGCT GCAGGTAACA GTAATGCCTA CCGTGCCCAG
CCACAGTTGG ACATGAACTA CTACAAAAAC GATGTTGGTC CATTTGATAT GCATGTCTAT
GGTCAGGCGG CCAAATTCAC CAGTGTCAAT CCAACTAACC CGGAAGCCAG TCGTTTCCAT
ATTGAACCTA CGGTTAACCT GCCCTTATCC AATAGCTGGG GAAGCATAAA TACAGAAGCC
AAACTGTTGG CCACCCACTA TCAACAGGAT ATTCCGGCCA GTTTTGCTGA CAATGCTAGC
AACCCCAAAC TGAAAGACTC AGTAAACCGG GTCCTACCAC AGTTTAAAGT GGATGGTAAG
GTGGTATTCG ATAGGTCAAT GGACTGGGCG ACGGGCTTTA CGCAGACATT GGAGCCTCGC
GCACAGTATC TCTACGTCCC TTACCGGAAC CAAGATGATA TCTATATATA TGACACCACG
TTGATGCAGT CGGATTACTC TGGTCTGTTC CGTGATCGTA CCTATAGTGG CTTGGACCGT
ATTGCATCGG CTAATCAGGT ATCTACCGGT TTAACCTCTC GCATATATGA TGATGCTCGG
GTTGAACGTT TTAATGTTTC TGTAGGTCAA ATCTATTACT TCAGTCGATC ACGCACAGGT
AATACCGAAG CCATCGATAA CAGTAACGAT ACAGGGAGCC TGGTTTGGGC TGGTGATACT
TTTTGGCGGA TCAACGATCA ACTGGGCCTG AAGGGCGGCG CACAGTATGA TACTCGGCTG
GGAAGTTTGA CCTTAGGTAA CGCTATAATG GAATATAGAA GAGACGCTGA TCGTATGATT
CAATTGAATT ACCGCTACGC GAGCCCAAAA TATATTCAGG CGGCTGTCCC TAAAGTATAC
AACCCTGACT ACCAGCAAGG CATCTCTCAG GTAGGTACCA CGGCCAGTTG GCCAATTGCT
GACCGCTGGG CGATCGTCGG GGCGTATTAT TACGATACCA AAGCCAAACA ACCTGCCAGC
CAGTTAGTTG GCTTGCAATA CAACACCTGT TGTTGGGCGG TAAACCTTGG CTATGAACGC
AAAATAACTG GCTGGAATGC ACAAGGCCAA ACCAGTAAGT ACGACAACAA AATAGGCTTT
AACATCGAAT TACGTGGTTT GAGCGGTGGT CATAGCCTTG GTACTGCTCA AATGCTGAAC
TCGGGCATTC TGCCTTATCA AAGTGCATTC TGA
 
Protein sequence
MLGVPTYDQP LVTGDPNQLP VRINADKTEA NYPDNALFTG NVIVQQGNST LTANQVELTQ 
VQKPGEVIPL RTVTATGDVN YDDPQIKLKG PKGWSNLNTK DTDIDKGKYQ MVGRQGRGDA
DLMKLRDQSR YTILKNGTFT SCLPGDNSWS VVGSEVIHDR EEQVVEVWNA RFKIGKVPVF
YSPYMQLPVG DKRRSGFLIP NAKFTSNNGF EFLLPYYWNI APNFDATITP HYMERRGLQW
QNEFRYLLAP GSGTMALDWL PNDRIYTGPD GTDKNATRWL YYWGHSGVMD QVWRFNINYT
RVSDPAYFTD LTSQYGSTTD GYATQIFTAG YANENWNATL SSKQFQVFTA AGNSNAYRAQ
PQLDMNYYKN DVGPFDMHVY GQAAKFTSVN PTNPEASRFH IEPTVNLPLS NSWGSINTEA
KLLATHYQQD IPASFADNAS NPKLKDSVNR VLPQFKVDGK VVFDRSMDWA TGFTQTLEPR
AQYLYVPYRN QDDIYIYDTT LMQSDYSGLF RDRTYSGLDR IASANQVSTG LTSRIYDDAR
VERFNVSVGQ IYYFSRSRTG NTEAIDNSND TGSLVWAGDT FWRINDQLGL KGGAQYDTRL
GSLTLGNAIM EYRRDADRMI QLNYRYASPK YIQAAVPKVY NPDYQQGISQ VGTTASWPIA
DRWAIVGAYY YDTKAKQPAS QLVGLQYNTC CWAVNLGYER KITGWNAQGQ TSKYDNKIGF
NIELRGLSGG HSLGTAQMLN SGILPYQSAF