| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3564 |
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| Symbol | |
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| ID | 6090569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3926229 |
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| End bp | 3927740 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641598648 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001722284 |
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| Protein GI | 170025779 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGAACA TGCAGAAAGC CCAACTCAAT GACACGCCAG ACATCAACGT CGATCTGGCT
GAAAACGAGT TAGATGACAT TTTAAAACGT TCTTTTCGCC CTCGAACTGA CGAAGCTTCC
GCCACAGTGC GCCGTGCCAT AGGCACGCTT GCTGCGTATG CCAATAAAGG CCAAGTGAAA
GTCAATCGTG ATGTCGTACT GACCATTGAG TCTTTAGTCG CTGAAATTGA CGAAAAACTT
TCCGATCAAA TGAACCTTAT TCTGCACCAT AAAGAGTTCC AAAAGCTGGA ATCAGCTTGG
CGCGGGCTTA GCTATCTTGT TGATAATACA GATGCTAATG AAACTTTAAA AATACGGGTA
CTGAACATTA GCCAAGATGA ACTGGGGAAA ACGCTTCGCC GTTATCGTGG CTCTGCATGG
GATCAAAGTC CGATATTTAA ACAGGTCTAT GAACATGAAT ATGGGCAGTT TGGTGGGGAA
CCTTTTGGTT GCATGATCGG TGATTATGAA TTCGATCACA GTCCACAGAG TGTGGCTCTG
CTGACCGAGT TAGCCAAGGT GGCCGCCGCC GCTCACTGTC CTTTCATTAC CTCTTCTTCC
CCAAGCATCA TGCAGATGAA TAACTGGAGG GAGCTGGGTA ACCCAAGGGA TATCGGCAAA
ATTTTTACCA CACCTGAATA TGCGCCATGG AGACGTTTAC GTGAGAGTAA TGACTCCCGC
TATCTGGTAC TGACTCTGCC ACGTTTTCTT TCGCGTCTGC CGTATGGTGC CAAAAATCAT
CCTATTGATG ATTTTGCTTT TGAAGAAGTG GTTAGCCCTC ATGCCAGTGA GGATTTCACT
TGGGCGAATG CGGCCTATGC CATGGGCGTC AATATTAACC GGGCCTTCAA TGAATATGGT
TGGTGTTCAA GGATCCGCGG TATTGAGTCG GGGGGGTCCG TAGAAGAACT TCCGGCCTAT
GCTTTTCCTT CTGACGAAGG CGGATATGAA CTCACTTGTC CGACAGAATT GGCAATTTCG
GACCGTCGTG AGAACGAGCT ATCCAATGCT GGGTTTTTAC CGCTGGTCTA CCGTAAGAAC
TCAGACTTTG CCGCCTTTAT CGGGTCGTGC ACCCTGCATG CACCGGCAAA CTATGATGAC
CCCGATGCGA CGGCGAACGC CAGATTATCG GCCCGTTTAC CTTACATTTT TGCCACCTGT
CGTTTCGCCC ATTACCTCAA ATGTATTGTG CGCGACAAAA TTGGTTCGTT CCGCTCGCGG
GATGACATGC AACTTTGGCT TAACGACTGG GTGATGAACT ACGTCGATGG TGACCCCTCC
ATTTCAACAG AAGCCACTAA AGCTAAACGC CCGCTGGCCG CTGCGGAAGT TCAAGTTGAA
GACGTAGAGG ATGATCCTGG TTTTTACCGC GCTCACTTCT ATTTACGCCC TCACTACCAA
CTTGAAGGTA TGACGGTTTC TCTGCGGCTG GTTTCTAAAC TTCCATCCAA CAAGGAAAGC
GAAAAGAAAT AA
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| Protein sequence | MENMQKAQLN DTPDINVDLA ENELDDILKR SFRPRTDEAS ATVRRAIGTL AAYANKGQVK
VNRDVVLTIE SLVAEIDEKL SDQMNLILHH KEFQKLESAW RGLSYLVDNT DANETLKIRV
LNISQDELGK TLRRYRGSAW DQSPIFKQVY EHEYGQFGGE PFGCMIGDYE FDHSPQSVAL
LTELAKVAAA AHCPFITSSS PSIMQMNNWR ELGNPRDIGK IFTTPEYAPW RRLRESNDSR
YLVLTLPRFL SRLPYGAKNH PIDDFAFEEV VSPHASEDFT WANAAYAMGV NINRAFNEYG
WCSRIRGIES GGSVEELPAY AFPSDEGGYE LTCPTELAIS DRRENELSNA GFLPLVYRKN
SDFAAFIGSC TLHAPANYDD PDATANARLS ARLPYIFATC RFAHYLKCIV RDKIGSFRSR
DDMQLWLNDW VMNYVDGDPS ISTEATKAKR PLAAAEVQVE DVEDDPGFYR AHFYLRPHYQ
LEGMTVSLRL VSKLPSNKES EKK
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