| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3557 |
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| Symbol | |
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| ID | 6088064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3914888 |
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| End bp | 3917107 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598641 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_001722277 |
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| Protein GI | 170025772 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA TTCGCCCGCA ACAGCTCGTG GTCTTGAAAA GCAGTTACCA GATAGGCCAT
GAAAGCCATA TGGGGATCAG CGTCGTTGCT GGCTGTTATC TCTCTAAACC TGAGCATATG
GTGACGGAGT CACAGATCTG GCAGGCATGG AAAGCGGCAC CGCTCTCTTT CCGCATGTTG
GACAGTGCTG AGCCAAAACC CTTTGCTGAG TTTTTGCTGG CCGGTCATGC CGGTATTGGT
GAAGAGGTTA CCTCGCTGAG TGCAGAGGTT AGTGTTGGCT CATTGACCCG GCGCTGGTGT
ATTGAGGGCG AAAGCAACAA AACGGGTCTG GTCATTAAAC CTTTCTTACG TATGTCGATG
GACCATACGC AAAGTTGGGG GGGCAAAGGC TGTAAGGAGA ATCCACTGGG ACGTGGGTAT
AACGATGAGC GCAAACCGAC GATTATGTCT TTAGGCCTCG ACGGCTCTGC TATCGTTCGC
TCACCGCTGG CGTCTCCGTC ACCTGTGCCT CATGACTTCC AACTGCGTAA AGTGCATATC
AATGAAGTCG CCTCGACCAT GACCGATCCT CAATATTTGG AAACATTTTA TCCCGGTTTG
CCACCGCAAA TTGATCGTCG CTATTTCCAA ATGGCTCCGC CAGGGCAGTG GCTGAAGAAA
AGCGCATGGC CCGATAGCGT GCCGTTCAAA CTCATCGGTT TTCGCCCGGA CAATGAGGAG
ATCAGCGGTG CGTTTCCTGC GGTCAGTGCA AGGGCGTTTG TTTGGGATAA CCCTTCAGCG
CCCCCCAGTG AGGTGACCTT ACTGCGGAAA ACACTGTGGC TGTTACCGGA TAACGATATG
GGGCTAATGG TGTTTACCGG CAGCGTGCCA CTGACTCACC TTTTTGATGA GCCTATCGAT
ACGTTGCTGG TGGGATTGGA TGACTCCCAT TCGCTACGTG AGTTGGAATA TTACCAACAG
GTCTATAAAA GTCGCAGCGT TGAAGGTGCT GCGAGTTTTG AATTCCTCAA AGATCCGGAA
CTGATGCCAG AGGGGATGCC GCTGAACGTC ATCCGGGATT TGGCGGATCA CCCAGACTCG
CTGCGTTATA GCGCTTCCGC CATGTCTGAA GCGGAGTCCG AACGTTTCTA TCAGGATGTT
CAGGATGCTA TCGATCGGCA GGAACAGCAG AAGAGTGAAG AACAAGAGAC GCTGGGTGAT
TTGAACGTCC CCGCAGCCGG TAAAGAGGAA GCGGGAACCC AATGGTTGGA AAGCAAAGAA
GATACGGCAA CCAACGTCAC ATTTTTAGGG ACTGACTTCT CTGGAATGAC CTTGGACAAC
AAGCAATTCC GCTATTGCAT GTTTACCGGT TGCCATTTTG ACAAGGCGAC ATTTAAAGAC
TGCACCTTCG AGCATTGCCA GTTTACGCAA AGTGATTTTG AAAACTCCCG TTGGAACAAT
GTGCATTTAA GTGGCTGTTT ATTCAAACAG GCAGAGTGGC AAAAAGCCGC CTTTACCCAC
TGTAAATGGG AGAAATCCAC CTTTGAGTAT GGGGTGTTTA AACACGCTCA GTTTACCGAC
AATGCGTTAG ATAACTGCCT GATTAACCAT AGTGATTTCA GCCTTGGCAC GTTTGATCAT
TGTACGCTGA ATGGCTGTTT CTTCTCCGAA ACACATTGTG ATCAAACACA ATTTAATCAG
GTCATCATCA CGTCGTGCAT ATTCGAAAAA TGCGACGGCC CGAAGGCTTG CTTTACCGAA
AGCACAATAG AGAAAACCTC GTTTATTAGC AGCAGTTGGG TGGGGGGGCG CTTGAGTCAT
TGCTATCTCA ATAGCTTGAC CACGGGCCTG AATACCAATC TCTCTGAGTC GCATTTTGAG
CAGTGCAGCC TGAATAAAAT GGGCTTCCTC AAGGTCAATT TACAATCCAG TACCTTTATT
AATTGCTCGA TGTTGGAGAG TTGCTGCGAT AAGGCTGATT TCTCTCAGGC GACGCTGATT
GCCTGTGATA TGACCGCGGT ACGGTTAAAA GATGCCAACT TAGTCCATAG CCACTGGCAG
AACACCAGCT TACAGCAAAG CATGTTTTAC AACGCTGACT TACGTGATGC CACTTTCCAG
CGTTGCAATC TGGCGGGCGC TAATCTGGCG ATGATCAGCC AAAACATGGA CACCCGATTT
GAACATTGTT TGACGGAAAA GACGCACTGG ATCCCGCGTC GTTACACCGT CCCGGCATAA
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| Protein sequence | MRIIRPQQLV VLKSSYQIGH ESHMGISVVA GCYLSKPEHM VTESQIWQAW KAAPLSFRML
DSAEPKPFAE FLLAGHAGIG EEVTSLSAEV SVGSLTRRWC IEGESNKTGL VIKPFLRMSM
DHTQSWGGKG CKENPLGRGY NDERKPTIMS LGLDGSAIVR SPLASPSPVP HDFQLRKVHI
NEVASTMTDP QYLETFYPGL PPQIDRRYFQ MAPPGQWLKK SAWPDSVPFK LIGFRPDNEE
ISGAFPAVSA RAFVWDNPSA PPSEVTLLRK TLWLLPDNDM GLMVFTGSVP LTHLFDEPID
TLLVGLDDSH SLRELEYYQQ VYKSRSVEGA ASFEFLKDPE LMPEGMPLNV IRDLADHPDS
LRYSASAMSE AESERFYQDV QDAIDRQEQQ KSEEQETLGD LNVPAAGKEE AGTQWLESKE
DTATNVTFLG TDFSGMTLDN KQFRYCMFTG CHFDKATFKD CTFEHCQFTQ SDFENSRWNN
VHLSGCLFKQ AEWQKAAFTH CKWEKSTFEY GVFKHAQFTD NALDNCLINH SDFSLGTFDH
CTLNGCFFSE THCDQTQFNQ VIITSCIFEK CDGPKACFTE STIEKTSFIS SSWVGGRLSH
CYLNSLTTGL NTNLSESHFE QCSLNKMGFL KVNLQSSTFI NCSMLESCCD KADFSQATLI
ACDMTAVRLK DANLVHSHWQ NTSLQQSMFY NADLRDATFQ RCNLAGANLA MISQNMDTRF
EHCLTEKTHW IPRRYTVPA
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