| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3540 |
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| Symbol | |
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| ID | 6090204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3892439 |
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| End bp | 3894100 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641598624 |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_001722260 |
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| Protein GI | 170025755 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACCT CGCGCCTGCA ACAACAATTT ATTCGTCTCT GGCAACGCTA TAACGGACAG
TCAACGGAAA CCACATTGCA GGCGCTGGCT GAAGTGCTGA ATTGTTCACG CCGCCATGTA
CGTTCTCTGC TGGGCAAGAT GCAGCACGCG GGCTGGCTCG ATTGGCAGGC TGAAGCTGGC
CGAGGAAAAC GCTCACAATT GATCTTCTTG CGTTCCGGGC TGGCGCTGCA ACAACAACGG
GCTGAAGAGT TGCTGGAGCA GGATCATATT GATCAGTTAG TCCAACTGGT CGGTGATAAA
AAAGCGGTAC GCCAAATGTT GCTGTCCCAG TTGGGACGTA GCTTCCGGCA AGGAAAACAT
ATTCTGCGGG TGCTCTATTA CCGCCCATTG GAGAACTTAT TACCCGGCAC CGCCCTACGC
CGCTCTGAAA CCCATATGGT GCGGCAAATT TTTAACGGGC TGACACGGAT AAATGAGGAA
AATGGGGAAC TCGAACCGGA CTTATCTCAT CACTGGCAAG CGATCACCCC CTTGCATTGG
CGCTTTTATT TGCGACCAGC CATTCATTTC CACCATGGCC GGGAACTGGA AATGAGTGAT
GTGATTAGCA GCCTGACCCG CCTGATCCCC CAACCCCTGT TTTCTCATAT TGCGGAGGTG
CGTTCACCGA CACCTTATGT GATTGATGTT TATCTCCATT CGCCAGATCA CTGGTTGCCA
TGGCTACTGG GCAGCGTTCA CGCCATGATT TTGCCGCAAG AGTGGGAAAC TCAGCCCGAT
TTTCACCGAC AGCCTATTGG TACCGGCCCT TATTCCGTGA TCCGCAATCA TCACAGCCAG
CTGAAAATTC AGGCATTCGA TAACTATTTT GGTTTCCGGG CACTGATTGA TGAGGTCAAT
ATCTGGGTAC TCCCAGAACT CTCCGAAGAA TTGGTGTATT CCGGGGTGCA ATTGCAAGCC
GACGATACGG GTAAAAATGA GCTGGAGAGC CGTTTAGAGG AAGGTTGCTA CTTCTTACTG
TTCGACCAAC GATCCCCTCA GGCCTGCACC CCGGAGATCC GCCGTTGGTT ATGTGAATTG
ATCACACCGA TAGCGTTACT CAGCCACGCC GATCCCTTCT ATCAACGTTA CTGGTCACCG
GCCTATGGCA TGTTGCCACG CTGGCACCAT AACCGACTCA CCACTCAAGA GCCAAAACCC
GAAGGGCTGA ACGAGCTGAC ACTGACGTTT TACAGCGAAC ATTCAGAGTT TGATGCCATC
AGCCAGACAC TGACCCAGTT ATTGGCTGCT CAGGGCGTGA CGTTAAAGAT ACAAGTCTTG
GACTACACCC GCTGGTATCA GGGGGATGCA CAAAGCGATA TCTGGCTCGG CAGCGCTAAC
TTTTACTTGC CACTCGAATT CTCGCTATTT GCCACCCTCT ATGAAATGCC GCTACTACAA
CATTGTCTGA GCGAAGAACT GCATCAAGAT ATTGAATCCT GGCGCAATAA TACCTTACTC
ATGGCCGATT GGAGCCAACG ACTGGTAAGC CAGCATCAAT TCCATCCGCT ATTTCATCAT
TGGTTAGAAT TATACGGTCA ACACAGTATG CGGGGAGTGC GTATGAATAC ACTCGGCTGG
TTTGATTTTA AATCCGCATG GTTTACCCCA CCAGAGGCCT AG
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| Protein sequence | MSTSRLQQQF IRLWQRYNGQ STETTLQALA EVLNCSRRHV RSLLGKMQHA GWLDWQAEAG
RGKRSQLIFL RSGLALQQQR AEELLEQDHI DQLVQLVGDK KAVRQMLLSQ LGRSFRQGKH
ILRVLYYRPL ENLLPGTALR RSETHMVRQI FNGLTRINEE NGELEPDLSH HWQAITPLHW
RFYLRPAIHF HHGRELEMSD VISSLTRLIP QPLFSHIAEV RSPTPYVIDV YLHSPDHWLP
WLLGSVHAMI LPQEWETQPD FHRQPIGTGP YSVIRNHHSQ LKIQAFDNYF GFRALIDEVN
IWVLPELSEE LVYSGVQLQA DDTGKNELES RLEEGCYFLL FDQRSPQACT PEIRRWLCEL
ITPIALLSHA DPFYQRYWSP AYGMLPRWHH NRLTTQEPKP EGLNELTLTF YSEHSEFDAI
SQTLTQLLAA QGVTLKIQVL DYTRWYQGDA QSDIWLGSAN FYLPLEFSLF ATLYEMPLLQ
HCLSEELHQD IESWRNNTLL MADWSQRLVS QHQFHPLFHH WLELYGQHSM RGVRMNTLGW
FDFKSAWFTP PEA
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