| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3522 |
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| Symbol | murF |
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| ID | 6087919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3868866 |
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| End bp | 3870242 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641598606 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_001722242 |
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| Protein GI | 170025737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0938171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAGG TCTCTCTGCG TTTTCTGGCT AGCTTACTTA ATGCTGAATA TATCGTTGCT
GAATCAGTCA GCGATGATAT TGAGATAACT GAAGTGACCA TTGATACCCG TAAGGTCACT
GCTGGTTGTC TGTTTGTTGC GCTGAAAGGC GAGCGTTTTG ATGGGCATGA TTTTGCCGAA
GATGCTATTG CCGCAGGTGC TGGCGCTTTG CTGGTAAGTA AACGCTTACT GGTGGGGGGG
CCGCAGTTAG TCGTCAAAGA CACGCGCTTG GCGTTAGGGC AATTTGCGGC TTGGGTTCGC
CAGCAAGTTC CGGCTCGGAT AGTGGCATTA ACCGGTTCAT CGGGTAAAAC CTCGGTAAAA
GAAATGGCGG CAGCGATTTT GCGCCAATGC GGCAATGTGC TGTATACCGC CGGTAACTTT
AATAACGATA TCGGTGTCCC GCTAACATTG CTGCGCCTAA CGGCCGAACA TGATTTTGCT
GTTATTGAAC TTGGTGCCAA CCATGTTGGT GAAATTGCCT ACACCACCGA TTTAAGCCGT
CCAGAAAGTG CTTTGGTGAA TAATTTAGCC GCCGCTCATC TGGAGGGGTT TGGTTCGCTG
GCCGGTGTGG CGCAAGCCAA AGGTGAGATC TTCGCTGGCT TGCCAGCCAA TGGCACGGCG
ATTATCAATG CCGACAGTAA CGACTGGCCG CACTGGCAAG AAACGCTACA TAACAAACGG
GTTTGGCGTT TCTCGCCCCA CGCCGCAGAA CATATTGATT TCTATGCCAG TGATGTGCGG
ATCACGCCTC AACTCACCTC CTTCACTTTG CATTCACCGT TTGGCACCGT GGCTATCGAA
TTGCCTCTAC CGGGGCAGCA TAACATCGCC AATGCGTTAG CGGCGGCAGC ATTAGCCATG
TCGGTTGGGG CGGATTTAGC CGCAGTACGC CAAGGGTTGG CGCAGTTACA AGCAGTACCT
GGCCGGTTAT TCCCCGTCCC ATTAGCGGAA GGCAAATTGC TGTTGGATGA CAGCTATAAC
GCCAACGTGG GTTCCATGAT TGCCGCCGCA CAGGTCTTGG CCGAGATGCC GGGTTACCGG
GTGATGGTGG TCGGTGATAT GGCCGAGTTG GGCGAAACCG CGGCAGATTG CCATCGTCAG
GTTGGTGAAG CCGCGAAACT CGCAGGCGTC GATAAAGTAT TAAGCGTTGG CACATTGAGC
CAGATACTGA GCAGTGCGAG CGGGAATGGC GAACACTTTC AGGATCAAAA TACATTGAGC
ACCCGTGTAA ACGCGTTGCT GAACGAATAT CCGGTTATCA CTGTTTTAAT TAAAGGTTCA
CGTAGCGCCG CTATGGAAAA TGTCGTGCGT GCGTTACAGG AGAAGGCATC ATGTTAG
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| Protein sequence | MIKVSLRFLA SLLNAEYIVA ESVSDDIEIT EVTIDTRKVT AGCLFVALKG ERFDGHDFAE
DAIAAGAGAL LVSKRLLVGG PQLVVKDTRL ALGQFAAWVR QQVPARIVAL TGSSGKTSVK
EMAAAILRQC GNVLYTAGNF NNDIGVPLTL LRLTAEHDFA VIELGANHVG EIAYTTDLSR
PESALVNNLA AAHLEGFGSL AGVAQAKGEI FAGLPANGTA IINADSNDWP HWQETLHNKR
VWRFSPHAAE HIDFYASDVR ITPQLTSFTL HSPFGTVAIE LPLPGQHNIA NALAAAALAM
SVGADLAAVR QGLAQLQAVP GRLFPVPLAE GKLLLDDSYN ANVGSMIAAA QVLAEMPGYR
VMVVGDMAEL GETAADCHRQ VGEAAKLAGV DKVLSVGTLS QILSSASGNG EHFQDQNTLS
TRVNALLNEY PVITVLIKGS RSAAMENVVR ALQEKASC
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