| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3520 |
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| Symbol | murD |
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| ID | 6088274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3866471 |
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| End bp | 3867787 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641598604 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001722240 |
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| Protein GI | 170025735 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.479155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGATT ATCAGGGTAA AAAAGTGGTC ATCATCGGGC TGGGGCTAAC CGGCCTTTCC
TGCGTTGATT TCTTTATAGC GCGTGGTGTC ACGCCGCGCG TGATGGATAC CCGCATCAAT
CCACCGGGCT TAGATCAATT ACCCGAAAGT GTCGAACAGC ATGTGGGTGA TTTGAACCAA
GAATGGCTAC TGGACGCTGA TTTAATTGTT GTTAGCCCCG GTATGGCTCT GGCACATCCT
GCATTAAGTG AAGCCGCCGA GGCCGGTGTC GAGATCATTG GCGATATCGA ACTGTTCTGC
CGTGAAAATC AGGCACCGGT TGTGGCTATC ACTGGCTCCA ACGGCAAAAG TACCGTGACG
ACGCTGGTCG GTGAAATGGC AAAAGCGGCA GGTTGGTCAG TGGGGGTCGG CGGCAATATC
GGCGTTCCGG CACTGACATT GCTGAAGCAA GATAACCAAT TAACCGTCTT GGAATTATCA
AGTTTCCAAC TGGAAACCAC CCACAGCTTG CGGGCCTCTG CTGCGACGAT TCTGAACGTG
ACGGAAGATC ATACTGACCG TTATCCACTC GGTTTGCAGC AATACCGTGC GGCGAAACTG
CGGGTGTATG AAAATGCCAA GGTTTGTGTC GTGAATGCCG ATGATGCACT CACCATGCCG
GTCCGTGGTG CTGATAGCCG TTGCATCAGT TTTGGGGTCG ATGTCGGTGA CTACCACCTG
AATAAGCAGC AGGGTGAAAT TTGGTTACGG GTTCGTGGTG AGAAAGTGCT GAACACCCGT
GAAATGAAAT TAAGTGGGCG TCATAACTAT ACCAATGCGC TGGCCGCCCT GGCATTAGCT
GATGCCGTGG GTATCCCACG GGCATCCAGT CTGAAAGCCT TGACGACCTT TTCCGGCTTG
CCACACCGCT TCCAATTGGT GCTTGAGCGC CATGGTGTGC GCTGGATCAA CGACTCCAAA
GCGACCAACG TGGGCAGCAC TGAAGCCGCG CTGGATGGTT TACAGGTTGA TGGCACCTTG
CATTTATTGT TGGGGGGCGA CGGTAAATCT GCTGATTTCT CCGGGTTAAC GCGCTTCCTG
CAAGGGGATC GCATCAAGGT CTACTGTTTT GGCCGCGATG GCGGTCAATT GGCTGCGTTG
CGCCCTGACG TCTCTCAACT TACCGAGACG ATGGCGCAGG CTATGGCGTT GGTGGCAAAA
GCTGTGCTAC CCGGCGATAG GGTGCTGCTG TCACCTGCGT GTGCCAGCCT GGATCAATTC
CGCAGCTTTG AGCATCGTGG TAATGAGTTT GCTCGTCTGG CAGAGGAGTT AGGCTGA
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| Protein sequence | MVDYQGKKVV IIGLGLTGLS CVDFFIARGV TPRVMDTRIN PPGLDQLPES VEQHVGDLNQ
EWLLDADLIV VSPGMALAHP ALSEAAEAGV EIIGDIELFC RENQAPVVAI TGSNGKSTVT
TLVGEMAKAA GWSVGVGGNI GVPALTLLKQ DNQLTVLELS SFQLETTHSL RASAATILNV
TEDHTDRYPL GLQQYRAAKL RVYENAKVCV VNADDALTMP VRGADSRCIS FGVDVGDYHL
NKQQGEIWLR VRGEKVLNTR EMKLSGRHNY TNALAALALA DAVGIPRASS LKALTTFSGL
PHRFQLVLER HGVRWINDSK ATNVGSTEAA LDGLQVDGTL HLLLGGDGKS ADFSGLTRFL
QGDRIKVYCF GRDGGQLAAL RPDVSQLTET MAQAMALVAK AVLPGDRVLL SPACASLDQF
RSFEHRGNEF ARLAEELG
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