| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3516 |
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| Symbol | ddl |
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| ID | 6090350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3861676 |
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| End bp | 3862596 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598600 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001722236 |
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| Protein GI | 170025731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.730478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAGA AAGTCGCGGT ATTGCTGGGT GGGACCTCTG CGGAGCGTGA AGTGTCATTA
CTGTCAGGTC AGGCGGTATT GGCAGGCTTG AAAGAAGCCG GTATCGATGC TTATGGGGTG
GATACCAAAG ATTTTCCGGT AACTCAGCTT AAAGAACAGG GCTTTGATAA AGTGTTTATC
GCCCTGCATG GTCGTGGTGG CGAAGACGGT ACGTTACAAG GCGTATTGGA ATTTCTACAA
CTGCCATATA CCGGCAGTGG TGTAATGGCA TCCGCCCTGA CAATGGACAA ATTGCGCACC
AAATTAGTCT GGCAAGCCTT GGGGTTGCCT ATTTCGCCTT ATGTTGCGTT GAATCGCCAA
CAGTTTGAAA CACTTTCCCC AGAGGAATTG GTTGCGTGTG TCGCTAAGCT TGGCCTGCCA
CTTATTGTCA AGCCAAGCCA TGAAGGCTCT AGCGTTGGGA TGAGTAAAGT TGATCACGCC
AGCGAATTGC AGAAGGCATT GGTTGAAGCT TTCCAACATG ACAGCGATGT ACTGATTGAG
AAATGGCTGA GCGGGCCAGA GTTTACTGTC GCGATCCTTG GGGATGAAGT TTTGCCTTCT
ATTCGTATTC AGCCTCCGGG CGTGTTTTAC GATTATGACG CTAAGTATTT GTCAGATAAA
ACACAATACT TCTGCCCAAG CGGTTTAAGT GATGAGTCGG AGCAACAATT GGCAGCGCTG
GCATTGCAGG CTTACCACGC GCTGGATTGC AGCGGTTGGG GGCGGGTCGA TGTGATGCAA
GACCGCGATG GTCATTTTTA CCTGCTTGAA GTGAACACTT CACCGGGTAT GACCAGCCAT
AGTTTGGTTC CAATGGCCGC CCGCCAGTAT GGGTTGAGTT TCTCCCAATT GGTGGCGCGC
ATTCTGATGT TGGCTGACTG A
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| Protein sequence | MAEKVAVLLG GTSAEREVSL LSGQAVLAGL KEAGIDAYGV DTKDFPVTQL KEQGFDKVFI
ALHGRGGEDG TLQGVLEFLQ LPYTGSGVMA SALTMDKLRT KLVWQALGLP ISPYVALNRQ
QFETLSPEEL VACVAKLGLP LIVKPSHEGS SVGMSKVDHA SELQKALVEA FQHDSDVLIE
KWLSGPEFTV AILGDEVLPS IRIQPPGVFY DYDAKYLSDK TQYFCPSGLS DESEQQLAAL
ALQAYHALDC SGWGRVDVMQ DRDGHFYLLE VNTSPGMTSH SLVPMAARQY GLSFSQLVAR
ILMLAD
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