| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3512 |
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| Symbol | lpxC |
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| ID | 6089550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3857320 |
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| End bp | 3858243 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641598596 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001722232 |
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| Protein GI | 170025727 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000014804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGATCA AACAAAGGAC TTTAAAACGT ATTGTTCAGG CGACGGGTGT CGGTTTGCAC
ACCGGTAAAA AAGTCACGCT GACAATGCGA CCCGCGCCGG CTAATACCGG GGTCATCTAT
CGTCGCACTG ACTTGAATCC ACCGGTTGAT TTTCCGGCAG ATGCAAAATC CGTGCGTGAT
ACCATGCTCT GTACTTGCCT GGTCAATGAG CATGACGTGC GTATTTCTAC TGTTGAACAT
CTCAACGCTG CTTTGGCAGG GTTAGGGATT GATAACATTA TTATTGAAGT TAACGCCCCC
GAAGTACCAA TCATGGATGG CAGCGCCAGT CCATTCGTGT ACTTGTTGCT GGATGCCGGT
ATTGAAGAGT TAAACTCAGC GAAGAAATTC CTGCGTTTGA AAGAGACAGT ACGGGTTGAA
GATGGTGATA AATGGGCTGA ATTGTCTCCA TTCAATGGAT TCCGTTTGGA CTTTACCATT
GATTTTAATC ACCCGGCGAT TGACTCAAGT ACACAGCGTT ATTGCTTAGA TTTCTCGGCC
GATTCTTTCG TCCGCCAAAT CAGCCGTGCG CGTACTTTTG GTTTCATGCG TGATATCGAA
TATCTGCAGT CCCGCGGTTT GTGCCTGGGC GGTAGTTTCG ATTGTGCCAT CGTGGTAGAT
GATTACCGCG TATTAAATGA AGATGGCCTA CGCTTTGAAG ATGAGTTTGT TCGTCACAAA
ATGTTGGACG CTATTGGCGA CCTGTTTATG TGCGGCCATA ATATTATTGG CGCATTTACG
GCGTACAAAT CTGGTCATGC CTTAAATAAC AAGCTGTTGC AGGCTGTTTT AGCGAAGCAA
GAAGCTTGGG AATTTGTGAC GTTCCAAGAT GAAGCTGAAA TGCCTTTGGC ATTCAAAGCA
CCGTCTACAG TATTAGCTTA CTAA
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| Protein sequence | MMIKQRTLKR IVQATGVGLH TGKKVTLTMR PAPANTGVIY RRTDLNPPVD FPADAKSVRD
TMLCTCLVNE HDVRISTVEH LNAALAGLGI DNIIIEVNAP EVPIMDGSAS PFVYLLLDAG
IEELNSAKKF LRLKETVRVE DGDKWAELSP FNGFRLDFTI DFNHPAIDSS TQRYCLDFSA
DSFVRQISRA RTFGFMRDIE YLQSRGLCLG GSFDCAIVVD DYRVLNEDGL RFEDEFVRHK
MLDAIGDLFM CGHNIIGAFT AYKSGHALNN KLLQAVLAKQ EAWEFVTFQD EAEMPLAFKA
PSTVLAY
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