Gene YPK_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3510 
Symbol 
ID6089684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3855977 
End bp3856441 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content51% 
IMG OID641598594 
ProductSecA regulator SecM 
Protein accessionYP_001722230 
Protein GI170025725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000122858 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCGG CGAGTCTTGG TGTGCCATCA AATCTGTCTG GCGTTCCAGA CCATGCGGCA 
TTAGCGAACA CATCATCCAG CCAAAGTCGT CAGAATCATG GTACGACAAA CTTCAACAGT
TTGGCACTGT TGCATGACAT ACACCGTCGC CCCTCATTCA GTGTAGATTA CTGGCAACAG
CATGCCCTGC GCACGGTCAT CCGTCACCTC TCTTTTGCTC TGGCACCACA AGCGGCATAT
GCACGCGTAC AAGAAGTCGC CGAAACAGAA CGGGTTGCTC CATCAAAAAT TCAGCAACTC
GCGTTACTGG ATACGCTAAA TGCACTACTG ACGCATGAAT TTAAGCCACC GGCCATTATT
CGCTATACAG AACAGGTTGA ACGGCCTGTT CTGTCGCCAT ATAAACCTGG GCTCTGGCTT
GCTCAAGTAC AAGGTATTCG TGCCGGTCCT GCCAACTTAA GCTAA
 
Protein sequence
MVAASLGVPS NLSGVPDHAA LANTSSSQSR QNHGTTNFNS LALLHDIHRR PSFSVDYWQQ 
HALRTVIRHL SFALAPQAAY ARVQEVAETE RVAPSKIQQL ALLDTLNALL THEFKPPAII
RYTEQVERPV LSPYKPGLWL AQVQGIRAGP ANLS