Gene YPK_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3508 
Symbol 
ID6090820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3852504 
End bp3852890 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content45% 
IMG OID641598592 
Productnucleoside triphosphate pyrophosphohydrolase 
Protein accessionYP_001722228 
Protein GI170025723 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.116101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACT TACAAATTGC TGTTGGGATC ATTCGGAACT CGCAACAGGA AATTTTTATC 
ACTCAACGTG CTGCTGATTC CCACATGGCT GGCTTTTGGG AGTTCCCCGG CGGCAAGATT
GAGCAGGGTG AAACACCCGA AATTGCCTTA AAACGTGAAT TGCTGGAAGA AACGGGGATT
GTGGTACAAC AGGCAACTTT ATTAACAATG CTGGAACATA CTTTTAGCGA TAGAATCGTC
ACATTGCATT TCTATCGAGT AGAGGTGTGG GATGGTGAAC CCTTTGGCCG TGAAGGGCAG
CCTATGCGTT GGGTATTGCA ATCTGAGCTA CGAGCTGACG AATTTCCTCC CGCTAATGCC
GCAATTATTG AATTATTAAC AAAATAA
 
Protein sequence
MKHLQIAVGI IRNSQQEIFI TQRAADSHMA GFWEFPGGKI EQGETPEIAL KRELLEETGI 
VVQQATLLTM LEHTFSDRIV TLHFYRVEVW DGEPFGREGQ PMRWVLQSEL RADEFPPANA
AIIELLTK