Gene YPK_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3504 
Symbol 
ID6087863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3850474 
End bp3851226 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content45% 
IMG OID641598588 
Producthypothetical protein 
Protein accessionYP_001722224 
Protein GI170025719 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000650274 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACC TTACCTCAAC AATACTTTTT GAACATCCGC TCAATGAAAA GATGCGCACT 
TGGCTAAGAA TGGAGTTTTT ATTACAACAG CTAGAAAGCC ACCGCTCATT AGATAATATT
GCCAATGCAT TAACCTTTTT CCGTACCGCA TCGGATTTAA TTGATGTACT TGAACGCGGT
GAAGTCCGTA CTGATCTGTT AAAAGAACTC GAGCGCCAAC AGCAAAAACT ACAGCAATGG
GCTGATATAC CCGGTGTTGA CGTGTCATTA GTAGACTCTC TGCGCAATCA GTTAAAAAGC
CGTGCCGCCG TATTAATGTC AGCCCCGCGT ATCGGGCAGT CACTAAAAGA AGATCGCTTG
ATCAGTGTGG TCCGCCAGCG CCTGAGTATC CCTGGAGGAT GTTGTAGTTT TGATTTACCG
ACGTTACATG TCTGGTTACA TCAACCGTCA GAACAACGAG ACCAACATAT CAATAAATTG
CTAGCGAGTC TGGCCCCTCT TCACCAGTCA CTGACGATCA TTTTGGACTT AATTCGCCAG
TCATGCCCTT TACGTAGCCA GATAAGTTTA AATGGTTTCT TTCAGGATAA TGCTGGGGGA
GCTGACCTGC TCAGATTACG TCTACCGCTC GATCCACAAC TGTATCCACA AATTTCCGGC
CATAAAACAC GGTATGCCAT TCGCTTTTTA GCGCTTGATA GTGAAAATGG CACCGTTCCG
GCCCGTTTAT CGTTTGAATT AGCCTGCTGC TGA
 
Protein sequence
MSDLTSTILF EHPLNEKMRT WLRMEFLLQQ LESHRSLDNI ANALTFFRTA SDLIDVLERG 
EVRTDLLKEL ERQQQKLQQW ADIPGVDVSL VDSLRNQLKS RAAVLMSAPR IGQSLKEDRL
ISVVRQRLSI PGGCCSFDLP TLHVWLHQPS EQRDQHINKL LASLAPLHQS LTIILDLIRQ
SCPLRSQISL NGFFQDNAGG ADLLRLRLPL DPQLYPQISG HKTRYAIRFL ALDSENGTVP
ARLSFELACC