Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3504 |
Symbol | |
ID | 6087863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3850474 |
End bp | 3851226 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641598588 |
Product | hypothetical protein |
Protein accession | YP_001722224 |
Protein GI | 170025719 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000650274 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACC TTACCTCAAC AATACTTTTT GAACATCCGC TCAATGAAAA GATGCGCACT TGGCTAAGAA TGGAGTTTTT ATTACAACAG CTAGAAAGCC ACCGCTCATT AGATAATATT GCCAATGCAT TAACCTTTTT CCGTACCGCA TCGGATTTAA TTGATGTACT TGAACGCGGT GAAGTCCGTA CTGATCTGTT AAAAGAACTC GAGCGCCAAC AGCAAAAACT ACAGCAATGG GCTGATATAC CCGGTGTTGA CGTGTCATTA GTAGACTCTC TGCGCAATCA GTTAAAAAGC CGTGCCGCCG TATTAATGTC AGCCCCGCGT ATCGGGCAGT CACTAAAAGA AGATCGCTTG ATCAGTGTGG TCCGCCAGCG CCTGAGTATC CCTGGAGGAT GTTGTAGTTT TGATTTACCG ACGTTACATG TCTGGTTACA TCAACCGTCA GAACAACGAG ACCAACATAT CAATAAATTG CTAGCGAGTC TGGCCCCTCT TCACCAGTCA CTGACGATCA TTTTGGACTT AATTCGCCAG TCATGCCCTT TACGTAGCCA GATAAGTTTA AATGGTTTCT TTCAGGATAA TGCTGGGGGA GCTGACCTGC TCAGATTACG TCTACCGCTC GATCCACAAC TGTATCCACA AATTTCCGGC CATAAAACAC GGTATGCCAT TCGCTTTTTA GCGCTTGATA GTGAAAATGG CACCGTTCCG GCCCGTTTAT CGTTTGAATT AGCCTGCTGC TGA
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Protein sequence | MSDLTSTILF EHPLNEKMRT WLRMEFLLQQ LESHRSLDNI ANALTFFRTA SDLIDVLERG EVRTDLLKEL ERQQQKLQQW ADIPGVDVSL VDSLRNQLKS RAAVLMSAPR IGQSLKEDRL ISVVRQRLSI PGGCCSFDLP TLHVWLHQPS EQRDQHINKL LASLAPLHQS LTIILDLIRQ SCPLRSQISL NGFFQDNAGG ADLLRLRLPL DPQLYPQISG HKTRYAIRFL ALDSENGTVP ARLSFELACC
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