| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3500 |
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| Symbol | |
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| ID | 6090934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3846906 |
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| End bp | 3848042 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641598584 |
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| Product | type IV pilin biogenesis protein |
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| Protein accession | YP_001722220 |
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| Protein GI | 170025715 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACTGG CAACTGAGAG AAACAGTGTC TATGAACATA TCATCCAACA TGGCTTACAG
CCCCTAGGCG TGAAAGGGGG AAGGCGGTTA TCTGCACGCT ACTGGCAAGG GGAACGGTTG
GTGGCAATGA CCCGCCAATT AGCGACTTTA TTGCAAGCGG GTTTACCGTT GGTCAACAGT
TTACAGTTAT TGGCAAAAGA GGCAGATGAC TCAGCATGGC GTTGCCTATT AGATGAGATA
AGTCAGCAAG TTGCACAAGG CCAGTCACTC TCGGAAGTGA TGGAACAGTA TCCACACGTA
TTCCCCCGAC TGTATCCTCC AGTGGTTGCC GTCGGGGAGC TTACGGGTAA TCTTGAGCAA
TGTTGTACTC AATTAGTACA CCATCAGGAA CGGCAGCAAA ATTTACACAA AAAAGTCATA
AAAGCGCTGA AATACCCCGT TGTGGTCTGC ATCGTCGCAT TGGTAGTCAG TGTCATTATG
TTAGTCATGG TGTTACCCGA ATTTGCACAA ATATATCAAT CGTTTGATAC CCCCCTGCCG
GGGCTAACTG CAAGCTTACT GTGGCTATCA ACTTTTCTCA CTTTTTATGG CCCCTATCTG
GCGCTGATAA TAGCAATAGT GTGTATTGGG TATTTCTATA CATTACGAAA AAAATCTCGC
TGGCAGCAAT GGGAACAGAC CATTCTATTA AGCATTCCCT TGGTCTCAAC ATTAATCCGT
GGTAGCTGCC TCAGCCAAAT TTTTCAAACG TTAGCTATCA CACAACAAGC CGGGCTACCC
CTGTCAGCCG GGTTAGATGC AGCGGCTCGA TCCATTCACA ATTACAATTA TCAGCAAGCC
TTAAGGTGTA TTCAAAAACA AATTAGCCAA GGTATACCGC TGTATACCAC TCTTAATCAG
CACCCTTTAT TTCCTGCCAT TTGTCAGCAG CTCATTAGGG TTGGTGAAGA ATCAGGCTCA
CTGGATGTGT TGCTGGAAAA GTTAGCCTGT TGGCATCAGC AACAAACTCA GAATTTGGCA
GATAACGTCA CTCAAATGCT AGAGCCACTT CTTATGCTGA TTATTGGCAG TATTGTCGGC
GTACTGGTGA TCGCCATGTA TTTACCCATA TTCCAGTTAG GTGATGTTAT CGGGTAA
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| Protein sequence | MLLATERNSV YEHIIQHGLQ PLGVKGGRRL SARYWQGERL VAMTRQLATL LQAGLPLVNS
LQLLAKEADD SAWRCLLDEI SQQVAQGQSL SEVMEQYPHV FPRLYPPVVA VGELTGNLEQ
CCTQLVHHQE RQQNLHKKVI KALKYPVVVC IVALVVSVIM LVMVLPEFAQ IYQSFDTPLP
GLTASLLWLS TFLTFYGPYL ALIIAIVCIG YFYTLRKKSR WQQWEQTILL SIPLVSTLIR
GSCLSQIFQT LAITQQAGLP LSAGLDAAAR SIHNYNYQQA LRCIQKQISQ GIPLYTTLNQ
HPLFPAICQQ LIRVGEESGS LDVLLEKLAC WHQQQTQNLA DNVTQMLEPL LMLIIGSIVG
VLVIAMYLPI FQLGDVIG
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