| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3496 |
|---|
| Symbol | |
|---|
| ID | 6088796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3843076 |
|---|
| End bp | 3843627 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641598580 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_001722216 |
|---|
| Protein GI | 170025711 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGG AAAACGGCTG GATTGTCGGG GTTAAACAGG TGCTGTCCCC CCATTTTGAT
CTGAGGCCAG AGGGTGAAAT GCCCTCTCTG CTGGTGATTC ATAGTATCAG TCTACCGCCC
AGTGAGTTTG GTGGCCCCTA TATCGATCAG CTCTTCACCG GGACACTCAA TGCCGATGAG
CATCCCTATT TTGCTAGTAT TGTACATTTA CGCGTCTCGG CCCATTGCTT GATTCGCCGT
GATGGTGAAA TCATTCAGTA TGTTCCGTTC GATAAACGGG CTTGGCATGC AGGTGTTTCC
GTATTTGCTG GGCGTGAGCG ATGTAACGAT TTTTCTATTG GGATCGAGCT GGAAGGGACA
GATGTGTTAC CGTTTACTCC CGTACAATAT CAACGACTGA CTGAGATCAG TGCGGTTTTA
TTTGCCCACT ATCCAATAAC GGTAGAGCGG GTGGCTGGTC ACAGTGAGAT CGCACCAGGG
CGTAAAACAG ACCCAGGGCT GGCCTTTGAT TGGTTTTTTT ATCAACAAAA TTTAGCTAAG
TTGCTTGTAT GA
|
|---|
| Protein sequence | MLLENGWIVG VKQVLSPHFD LRPEGEMPSL LVIHSISLPP SEFGGPYIDQ LFTGTLNADE
HPYFASIVHL RVSAHCLIRR DGEIIQYVPF DKRAWHAGVS VFAGRERCND FSIGIELEGT
DVLPFTPVQY QRLTEISAVL FAHYPITVER VAGHSEIAPG RKTDPGLAFD WFFYQQNLAK
LLV
|
|---|
| |