| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3494 |
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| Symbol | |
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| ID | 6088847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3840134 |
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| End bp | 3841531 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641598578 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001722214 |
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| Protein GI | 170025709 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATC AACAAGAGGG TGCTGAGCTA AAACGGGGGC TTAAAAACCG CCATATTCAG
CTTATTGCCC TAGGTGGTGC AATTGGTACC GGACTATTCC TCGGCATAGC ACAGACCATC
AAAATGGCTG GGCCTTCGGT TTTACTGGGG TACGCAATTG GGGGTTTTAT TGCGTTTCTG
ATAATGCGCC AGCTAGGCGA AATGGTGGTT GAAGAACCTG TAGCCGGTTC CTTTAGCCAC
TTTGCGTATA AATATTGGGG ACACTTTGCC GGTTTTGCTT CTGGCTGGAA CTACTGGGTG
CTGTATGTGT TGGTGGCGAT GGCCGAACTA ACCGCAGTGG GGATCTATGT GCAATATTGG
TGGCCAGAAA TCCCTACCTG GGTCTCCGCC GCCGTCTTCT TCTTGGCCAT CAACGCCATC
AACCTGGCTA ACGTAAAAGT CTATGGTGAG ATGGAGTTTT GGTTTGCCAT CATTAAAGTG
ATCGCGATTA TTGCGATGAT TTTATTTGGC GGTTACCTGC TCATCAGTGG CCGGGGTGGC
CCAGAAGCCA CGGTAACCAA CTTATGGGCC CAAGGCGGTT TCTTCCCGAA TGGCATCATG
GGTCTGGTGA TGGCAATGGC GGTAATTATG TTCTCTTTCG GTGGCCTTGA ATTAGTGGGT
ATCACCGCAG CAGAAGCAGA AGACCCGGCC AAAAGCATTC CGAAGGCAAC CAATCAGGTT
ATCTACCGTA TTCTTCTGTT TTATATTGGT TCTCTGGCAA TCTTGTTATC ACTCTATCCA
TGGGGAAAAG TGGTCGAAGG CGGCAGCCCA TTCGTATTGA TTTTCGATGC GCTGGACAGT
AATTCAGTCG CCACTGTCTT GAATATTGTC GTACTGACGG CGGCACTCTC GGTCTACAAC
AGTTGCGTAT ACTGTAACAG CCGCATGTTG TTTGGTTTAG CTAAACAAGG TAATGGCCCG
AAAATCCTGT TGAAAGTGGA TGGCCGAGGT GTTCCAGTCA TTGCGATTGC TGTTTCTGCG
TTTGCTACCG CGTTTTGTGT ACTGATTAAC TACCTGTTAC CTAGCCGTGC CTTTGAATTA
CTGATGGCAT TAGTGGTATC CGCGTTGGTG ATCAACTGGG CGATGATTAG CCTGGCACAC
CTGAAATTCC GTGCGGCGAA AAACCGCCAG GGCGTAATAC CAAAATTCAA AGCATTTTGG
TATCCGTTCG GTAACTGTTT GTGTTTGTTG TTCCTGACCG GCATCTTAGT GATCATGTTT
CTGACACCCA GCATCCGGAT TTCAGTGATA CTTATTCCTG TCTGGGTAGT CGTCCTAGCG
ATTGGTTATA TTCTGAAGAA TCAGAGCCAA CGTCAGAATC AGCAACTGAG CGCTAGCAGC
AGGAAAGCAA CCAAGTAA
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| Protein sequence | MSDQQEGAEL KRGLKNRHIQ LIALGGAIGT GLFLGIAQTI KMAGPSVLLG YAIGGFIAFL
IMRQLGEMVV EEPVAGSFSH FAYKYWGHFA GFASGWNYWV LYVLVAMAEL TAVGIYVQYW
WPEIPTWVSA AVFFLAINAI NLANVKVYGE MEFWFAIIKV IAIIAMILFG GYLLISGRGG
PEATVTNLWA QGGFFPNGIM GLVMAMAVIM FSFGGLELVG ITAAEAEDPA KSIPKATNQV
IYRILLFYIG SLAILLSLYP WGKVVEGGSP FVLIFDALDS NSVATVLNIV VLTAALSVYN
SCVYCNSRML FGLAKQGNGP KILLKVDGRG VPVIAIAVSA FATAFCVLIN YLLPSRAFEL
LMALVVSALV INWAMISLAH LKFRAAKNRQ GVIPKFKAFW YPFGNCLCLL FLTGILVIMF
LTPSIRISVI LIPVWVVVLA IGYILKNQSQ RQNQQLSASS RKATK
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