Gene YPK_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3479 
Symbol 
ID6088379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3821437 
End bp3821982 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID641598563 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_001722199 
Protein GI170025694 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCTG TGAAGCACAC TGTAGAAGTC ATGATTTCCG AACAGGAAGT AAAAACCCGT 
ATCGCCGAAT TAGGCCGCCA AATCTCTGAA CATTACCGCG ACAGTGGCAG TGATATGGTG
CTGGTGGGGT TACTCCGTGG CTCATTTATG TTTATGGCTG ATTTATGCCG TACCATTGAT
GTTTCTCATG AAGTCGATTT TATGACGGCC TCCAGCTACG GCAACGGTAT GAGCACCACC
CGCGATGTGA AGATCCTGAA AGATCTGGAT GAAGATATCC GTGGTAAAGA TGTGCTGATT
GTTGAAGATA TTATTGATTC CGGTAATACG CTGAGCAAAG TACGTGAAAT TCTGCAATTG
CGTGGCCCAA AATCACTGGC TATCTGTACG CTGTTGGATA AACCTGAGCG CCGTGAAGTG
CACGTTCCGG TTGAGTGGGT GGGTTTCACC ATTCCCGATG AGTTTGTTGT AGGCTACGGG
ATCGATTATG CGCAGCGGTA TAGGCATCTT CCGTATGTAG GTAAGGTTGT CACTTTAGAC
GAGTGA
 
Protein sequence
MLAVKHTVEV MISEQEVKTR IAELGRQISE HYRDSGSDMV LVGLLRGSFM FMADLCRTID 
VSHEVDFMTA SSYGNGMSTT RDVKILKDLD EDIRGKDVLI VEDIIDSGNT LSKVREILQL
RGPKSLAICT LLDKPERREV HVPVEWVGFT IPDEFVVGYG IDYAQRYRHL PYVGKVVTLD
E