| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3471 |
|---|
| Symbol | |
|---|
| ID | 6090102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3813579 |
|---|
| End bp | 3814058 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641598555 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_001722191 |
|---|
| Protein GI | 170025686 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000222499 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGG TCTATATCGC GCTGGGTAGC AATTTGGCCA TGCCACTACA ACAGGTTAGC
GCGGCACGGG AAGCCTTGGC GCATCTGCCG CGTAGCCGGT TAGTCGCGTG TTCGCCACTT
TACCGCACCA AGCCATTAGG CCCACAGGAT CAACCCGATT TTCTCAATGC CGTGGTCGCA
CTGGATACGT CGTTGCCACC AGAGCAGTTG CTGGATCACA CACAAGCGAT CGAACGCAAC
CAAGGCCGGG TGAGAAAAGA GCAGCGCTGG GGGCCACGGA CGCTGGATCT GGATATTATG
TTGTATGGCG ATCAGGTGAT AAAAACTGAT CGCCTAACGA TTCCGCATTA TGGTCTGAAA
GCGCGTGAAT TTATGCTCTA TCCACTGGCA GATATCGCCC CAGATCTTAT TTTCCCCGAT
GGCGAATCCC TATCAGAATG CCTTAAGCGG GTCGATAAGA ACGGCTTGGT TCTCTGGTAA
|
|---|
| Protein sequence | MIRVYIALGS NLAMPLQQVS AAREALAHLP RSRLVACSPL YRTKPLGPQD QPDFLNAVVA
LDTSLPPEQL LDHTQAIERN QGRVRKEQRW GPRTLDLDIM LYGDQVIKTD RLTIPHYGLK
AREFMLYPLA DIAPDLIFPD GESLSECLKR VDKNGLVLW
|
|---|
| |