| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3464 |
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| Symbol | |
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| ID | 6089270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3806017 |
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| End bp | 3808506 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641598548 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_001722184 |
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| Protein GI | 170025679 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGAGTG AGAGAAAAAA TGATGTTGCG ATAGCGGCGT TACCGGTGAG TGAAGTGCTC
GGCGAGTTGC TCTCTGCATT GCAATCCTCA TCGCAAGTCC TGCTTCATGC CCCAACCGGT
GCCGGTAAAT CTACCTGGCT GCCGCTACAA ATCTTGCAAC AAAGTCAGTT TCTTAATAGC
GGGTCACCGG GCCGCATCAT TATGCTGGAG CCACGGCGAC TGGCGGCGAA AAATGTGGCT
TACCGTTTGG CGCAACAATT GGGTGAATTG CCCGGCCAGA CAGTAGGTTA CCGGATGCGC
GCAGAAAGCA AGATCGGGCC GGATACGCGT CTGGAAGTGG TGACCGAAGG TATTTTGACT
CGGATGCTAC AACAGGATGC CGAGCTTCAG GGCGTGTCAT TGGTGATCCT TGATGAATTC
CACGAACGCA GTCTGCAAGC AGATTTGGCG CTAGCGTTAT TGCTGGATGT GCAACAGGGG
CTGCGCGATG ATCTGAAACT ATTAATCATG TCAGCCACGC TGGATAACCA GCGCCTTTCT
GCTTTGTTAC CCTCCGCTCC GGCCATTGTC TCGGCTGGGC GCAGTTTCCC GGTTGAACGC
AGTTATCAGC CGCTCTCCAG CCATGAACGG TTGGAAGAGG GGGTTGCCAG CCGCGTTAAA
CGCTTGCTAA ATGAACAGCC CGGTTCCTTG TTGCTGTTTT TACCGGGTGT CAGTGAAATC
CATCGAGTGA TGGAACGGCT GCATGGCGAG GTCGCCAGCG ATACCGATTT GTGCCCGCTG
TACGGTGCTT TGCCACTCAG TGAACAGCAA AAAGCGATTC AACCGGCCGC TATCGGGCGA
CGTAAAGTGG TGCTGGCAAC CAATATTGCC GAAACCAGTT TGACCATTGA GGGCATCCGG
TTGGTGGTTG ATAGCGGGCT GGAACGGGTT GCGCGTTTTG ATATCAAAAA CGGTCTGACT
CGCTTGGTCA CTCAGCGTAT CAGTCAGGCG TCAATGGTCC AGCGCGCAGG CCGTGCCGGG
CGGCTAGAAC CGGGTATCTG TTGGCATCTG TTTGCCAAAG AGCAGGCCGA ACGGGCGGCG
GAATACAGTG AACCGGAAAT ACTGAACAGC GATTTATGCG GTCTGTGGTT GGAATTACTG
AGTTGGGGAT GTCAGGATGC GGCGCAACTC TGTTGGCTCG ATCACCCCCC GGCAGCGGCA
CTGGCTGTGG CCCGTGATTT ATTAGGGCGA TTGGATGCCA TTGATGACCA AGGGCAGTTG
ACGGCCACGG GGCGCACCAT GGCAACGCTG GGCTGCGAAC CTCGATTGGC GGCCATGTTG
TGCTTTGGGG CGGGGCATAG CCCCGATGCA CTGGCTACGG CTGCGTTGTT GGCGGCTATT
TTGGAAGAAC CCCCTCGCTC TGGCCAAATA GATTTACATG ACTGGCTCAG CCGGCCGCAG
CCTCACTGGC AACGGCGCGC CAGACAACTG ACACAAAGGC TTAACGCGCG CGGAGGCAGT
GTAGACCATG CGCTGGCCGC ACAATTGCTG GCGCTGGCTT ATCCGGATAG GATCGCACAG
CAGCGGGGGC AGGATGGGCG CTACCTGCTG GCTAACGGCA TGGGGGCTGC CATGGCGCAG
GATGAGGCGC TATCGCGATC CCCCTGGCTA GTGGCGGTTG GGCTACTGCA AAACCACAGC
GGGCCGGATG CACGTATTTT GCTGGCCTTG CCCGTTGACA TCGAACAGTT GGTGACGTGT
CTGCCGCGGC AAGTGGAAGA GCGCACGGTG GTGGAGTGGG ATGATGAAAA AGGTACGCTG
CGAGCCTGGC GGCGCTGGCA AATTGGGCGT TTGATCCTGC GGGCGCAGCC ATTGGCTAAA
CCGGATGACG CGGCATTGCA GCAGGCCTTG CTAAACTGGG TTCGGGAGCA AGGATTACAG
ATACTTAACT GGGATGAACC TGCCGAGCAG CTACGTACCC GCTTACAATG TGCTGCCCGT
TGGTTGCCAG AGGCGCCATG GCCTGCGGTC GATGACGACA GTTTGCAGGA TAAACTGGCG
ATCTGGTTGC AGCCGTCATT ATCCGGTGTT CGTGATCTAC GTGGGCTTCG GCAGGTGAAT
ATTGCTGAAG CCTTAACCCG CTTGTTAGAT TGGAAACAAC GCCAACGGCT GGATACCGAA
CTGCCAACTC ATTACACTGT GCCCACTGGC AGTCGCCTGC CAATCCGTTA TTATGTCGAC
CGGCCGCCGG TGTTGGCGGT ACGTTTGCAG GAGGTTTTTG GTGAACAGCA AAGCCCTATG
CTGGCGAGCG GGCGGGTTGC GGTGGTGCTT GAACTGCTTT CTCCCGCCCA TCGGCCATTA
CAGATTACCG GCGATTTAGC GGCATTCTGG CAGGGGGCGT ATCGTGAGGT GCAAAAAGAG
ATGAAAGGGC GTTACCCCAA ACATGTCTGG CCTGATGACC CGGCACATAC CCGGCCAACC
CGCAGAACCA AAAAATATCA AGATAAGTGA
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| Protein sequence | MVSERKNDVA IAALPVSEVL GELLSALQSS SQVLLHAPTG AGKSTWLPLQ ILQQSQFLNS
GSPGRIIMLE PRRLAAKNVA YRLAQQLGEL PGQTVGYRMR AESKIGPDTR LEVVTEGILT
RMLQQDAELQ GVSLVILDEF HERSLQADLA LALLLDVQQG LRDDLKLLIM SATLDNQRLS
ALLPSAPAIV SAGRSFPVER SYQPLSSHER LEEGVASRVK RLLNEQPGSL LLFLPGVSEI
HRVMERLHGE VASDTDLCPL YGALPLSEQQ KAIQPAAIGR RKVVLATNIA ETSLTIEGIR
LVVDSGLERV ARFDIKNGLT RLVTQRISQA SMVQRAGRAG RLEPGICWHL FAKEQAERAA
EYSEPEILNS DLCGLWLELL SWGCQDAAQL CWLDHPPAAA LAVARDLLGR LDAIDDQGQL
TATGRTMATL GCEPRLAAML CFGAGHSPDA LATAALLAAI LEEPPRSGQI DLHDWLSRPQ
PHWQRRARQL TQRLNARGGS VDHALAAQLL ALAYPDRIAQ QRGQDGRYLL ANGMGAAMAQ
DEALSRSPWL VAVGLLQNHS GPDARILLAL PVDIEQLVTC LPRQVEERTV VEWDDEKGTL
RAWRRWQIGR LILRAQPLAK PDDAALQQAL LNWVREQGLQ ILNWDEPAEQ LRTRLQCAAR
WLPEAPWPAV DDDSLQDKLA IWLQPSLSGV RDLRGLRQVN IAEALTRLLD WKQRQRLDTE
LPTHYTVPTG SRLPIRYYVD RPPVLAVRLQ EVFGEQQSPM LASGRVAVVL ELLSPAHRPL
QITGDLAAFW QGAYREVQKE MKGRYPKHVW PDDPAHTRPT RRTKKYQDK
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