| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3462 |
|---|
| Symbol | |
|---|
| ID | 6089257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3802312 |
|---|
| End bp | 3803106 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641598546 |
|---|
| Product | iron-hydroxamate transporter ATP-binding subunit |
|---|
| Protein accession | YP_001722182 |
|---|
| Protein GI | 170025677 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACCTAC AGGCAAGCCA CTCCAGCACT TTTATACTCC GTGAACTGAG TTTTTCGGTT
CCTGGTCGAA CCTTATTACA GCCGCTGTCA CTGACGTTTC CGCAAGGGAA AGTCTGTGGG
TTGATCGGCC ATAACGGTTC CGGTAAATCG ACATTGCTAA AAATGCTGGG CCGTCATCAA
CCACCATCAA GTGGTCAGGT TGTGCTCAAC GATATGCCAC TGGCCCAATG GGATAGCAAA
GCGTTTGCCC GCGAAGTGGC CTATTTACCG CAGCAATTAC CGGCCGCAGA AGGGATGACG
GTGCGTGAAT TAGTCGCCAT CGGCCGCTAT CCGTGGCATG GTGCGCTAGG GCGCTTTCGT
CAGGAAGATC GCCAACAAGT CGAAGAGGCG ATTGCATTGG TAGATTTGAA ACCACTGGCT
AACCGCCTGG TGGACAGCTT GTCTGGCGGT GAGCGGCAGC GGGCTTGGTT GGCGATGATG
GTGGCGCAAA ACAGCCGCTG CCTGCTGCTG GATGAGCCTA CCTCCGCGCT GGATATTGCT
CATCAGGTGG AGGTCTTGGG GCTAATTCAA CGTCTCAGCC ACGAGCGTGG CCTAACCGTA
ATTGCCGTGT TACACGATAT CAATATGGCG GCTCGTTATT GTGACCATCT CGTGGCATTG
CGGGGCGGTG AGATGATCGC CCAAGGCCCG GCAGATAGCC TGATGCAGAG TGCGGTGTTA
GAACAAATTT ATGGTATCCC AATGGGTATT TTACCGCACC CGGCTGGCGG TGCGCCGGTA
AGTTTTGTTT ATTAA
|
|---|
| Protein sequence | MDLQASHSST FILRELSFSV PGRTLLQPLS LTFPQGKVCG LIGHNGSGKS TLLKMLGRHQ
PPSSGQVVLN DMPLAQWDSK AFAREVAYLP QQLPAAEGMT VRELVAIGRY PWHGALGRFR
QEDRQQVEEA IALVDLKPLA NRLVDSLSGG ERQRAWLAMM VAQNSRCLLL DEPTSALDIA
HQVEVLGLIQ RLSHERGLTV IAVLHDINMA ARYCDHLVAL RGGEMIAQGP ADSLMQSAVL
EQIYGIPMGI LPHPAGGAPV SFVY
|
|---|
| |