Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3458 |
Symbol | |
ID | 6089611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3795816 |
End bp | 3797252 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598542 |
Product | chloride channel protein |
Protein accession | YP_001722178 |
Protein GI | 170025673 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.41349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCATT CAACGCAACA ACTTTCTCCT GAAGGCGTCG CTGAAGGCAA GCGTGGCCGT TTGATCCGTG AACTGGTTAA TCGTGATAAG ACACCCTTAA TTATTCTTAT CATGGCCGCT GTTGTCGGTG TGGTAACGGG ATTATTAGGC GTAGCATTTG ATCGCGGTGT CGATTGGGTC CAGCAACAGC GGCTGCTAGC GCTGGCTAAT GTCGCGGATT ACGCACTCTT GGTGTGGCCT CTGGCTTTTA TCATGTCCGC ACTGCTAGCG ATGATGGGCT ATTTTTTGGT TAGTCGCTTT GCTCCTGAGG CTGGGGGGTC TGGGATCCCC GAAATCGAAG GGGCAATGGA GGAAATGCGG CCAGTGCGCT GGTGGCGCGT AATCCCTGTT AAATTTATTG GCGGCCTTGG GACATTGGGC GCAGGAATGG TTTTAGGCCG TGAAGGACCC ATGGTCCAAA TGGGGGGCAA CAGTGGGCGA ATGATCGTGG ATATTTTTCG TTTGCGTAGC CCAGAAGCCC GTCATTCACT ATTAGCAACC GGTGCAGCCG CAGGGCTGTC TGCGGCATTT AATGCCCCGC TGGCAGGGAT TCTGTTTGTT ATCGAAGAGA TGCGCTCGCA ATTTCGCTAC AGCCTAGTCT CTATTAAAGC CGTATTTATC GGGGTGATTA CCTCAACGAT TGTTTACCGC TATTTTAATG GTGAACGTGC AATTATTGAG GTCGGTAAAC TCAGTGATGC TCCGCTAAAC ACCCTTTGGC TTTATTTATT ATTAGGCATT ATTTTTGGTG CTGTGGGCGT CATATTCAAT GCCCTTATCT TTCGAACACA AGATATGTTT GTGCGCTTTC ATGGTGGTGA TTGGCGTAAA TTAGTTCTGA TCGGTGGCTT GCTTGGCGGA ATGTGCGGTT TATTAGCACT GCTTCATGGC AATGCGGTGG GAGGGGGGTT TGCATTGATC CCTATCGCGG CAGCCGGTAA TTTCAGCATC GGCATGCTGT TGTTCATTTT TATCGCTCGG GTCATCACGA CCTTGCTGTG TTTTGGATCG GGCGCTCCAG GGGGAATATT TGCCCCAATG TTGGCATTAG GGACCATTTT GGGGACCGCA TTTGGTCTGT CTTGCGCGCA CTTTTTCCCA CAATATGGCA TCGAAGCCGG TACTTTCGCC ATTGCGGGTA TGGGCGCACT GTTTGCTGCC TCAGTACGTG CACCGTTGAC TGGGATCGTA TTGGTACTGG AAATGACCGA TAATTATCAG CTTATTTTAC CGATGATTGT TACCTGCCTG GGAGCGACGT TGATCGCTCA ATTTATGGGG GGGAAACCGT TGTATTCGGC CATCCTAGCT CGCACATTAG CCAAGCAAGA GCAAGCGCGT GCCACGGTAA TAGCACAAGA ACCGGCGGTT GAAAATACCC CACAAATAGG CAAATAA
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Protein sequence | MTHSTQQLSP EGVAEGKRGR LIRELVNRDK TPLIILIMAA VVGVVTGLLG VAFDRGVDWV QQQRLLALAN VADYALLVWP LAFIMSALLA MMGYFLVSRF APEAGGSGIP EIEGAMEEMR PVRWWRVIPV KFIGGLGTLG AGMVLGREGP MVQMGGNSGR MIVDIFRLRS PEARHSLLAT GAAAGLSAAF NAPLAGILFV IEEMRSQFRY SLVSIKAVFI GVITSTIVYR YFNGERAIIE VGKLSDAPLN TLWLYLLLGI IFGAVGVIFN ALIFRTQDMF VRFHGGDWRK LVLIGGLLGG MCGLLALLHG NAVGGGFALI PIAAAGNFSI GMLLFIFIAR VITTLLCFGS GAPGGIFAPM LALGTILGTA FGLSCAHFFP QYGIEAGTFA IAGMGALFAA SVRAPLTGIV LVLEMTDNYQ LILPMIVTCL GATLIAQFMG GKPLYSAILA RTLAKQEQAR ATVIAQEPAV ENTPQIGK
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