Gene YPK_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3458 
Symbol 
ID6089611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3795816 
End bp3797252 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content50% 
IMG OID641598542 
Productchloride channel protein 
Protein accessionYP_001722178 
Protein GI170025673 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.41349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCATT CAACGCAACA ACTTTCTCCT GAAGGCGTCG CTGAAGGCAA GCGTGGCCGT 
TTGATCCGTG AACTGGTTAA TCGTGATAAG ACACCCTTAA TTATTCTTAT CATGGCCGCT
GTTGTCGGTG TGGTAACGGG ATTATTAGGC GTAGCATTTG ATCGCGGTGT CGATTGGGTC
CAGCAACAGC GGCTGCTAGC GCTGGCTAAT GTCGCGGATT ACGCACTCTT GGTGTGGCCT
CTGGCTTTTA TCATGTCCGC ACTGCTAGCG ATGATGGGCT ATTTTTTGGT TAGTCGCTTT
GCTCCTGAGG CTGGGGGGTC TGGGATCCCC GAAATCGAAG GGGCAATGGA GGAAATGCGG
CCAGTGCGCT GGTGGCGCGT AATCCCTGTT AAATTTATTG GCGGCCTTGG GACATTGGGC
GCAGGAATGG TTTTAGGCCG TGAAGGACCC ATGGTCCAAA TGGGGGGCAA CAGTGGGCGA
ATGATCGTGG ATATTTTTCG TTTGCGTAGC CCAGAAGCCC GTCATTCACT ATTAGCAACC
GGTGCAGCCG CAGGGCTGTC TGCGGCATTT AATGCCCCGC TGGCAGGGAT TCTGTTTGTT
ATCGAAGAGA TGCGCTCGCA ATTTCGCTAC AGCCTAGTCT CTATTAAAGC CGTATTTATC
GGGGTGATTA CCTCAACGAT TGTTTACCGC TATTTTAATG GTGAACGTGC AATTATTGAG
GTCGGTAAAC TCAGTGATGC TCCGCTAAAC ACCCTTTGGC TTTATTTATT ATTAGGCATT
ATTTTTGGTG CTGTGGGCGT CATATTCAAT GCCCTTATCT TTCGAACACA AGATATGTTT
GTGCGCTTTC ATGGTGGTGA TTGGCGTAAA TTAGTTCTGA TCGGTGGCTT GCTTGGCGGA
ATGTGCGGTT TATTAGCACT GCTTCATGGC AATGCGGTGG GAGGGGGGTT TGCATTGATC
CCTATCGCGG CAGCCGGTAA TTTCAGCATC GGCATGCTGT TGTTCATTTT TATCGCTCGG
GTCATCACGA CCTTGCTGTG TTTTGGATCG GGCGCTCCAG GGGGAATATT TGCCCCAATG
TTGGCATTAG GGACCATTTT GGGGACCGCA TTTGGTCTGT CTTGCGCGCA CTTTTTCCCA
CAATATGGCA TCGAAGCCGG TACTTTCGCC ATTGCGGGTA TGGGCGCACT GTTTGCTGCC
TCAGTACGTG CACCGTTGAC TGGGATCGTA TTGGTACTGG AAATGACCGA TAATTATCAG
CTTATTTTAC CGATGATTGT TACCTGCCTG GGAGCGACGT TGATCGCTCA ATTTATGGGG
GGGAAACCGT TGTATTCGGC CATCCTAGCT CGCACATTAG CCAAGCAAGA GCAAGCGCGT
GCCACGGTAA TAGCACAAGA ACCGGCGGTT GAAAATACCC CACAAATAGG CAAATAA
 
Protein sequence
MTHSTQQLSP EGVAEGKRGR LIRELVNRDK TPLIILIMAA VVGVVTGLLG VAFDRGVDWV 
QQQRLLALAN VADYALLVWP LAFIMSALLA MMGYFLVSRF APEAGGSGIP EIEGAMEEMR
PVRWWRVIPV KFIGGLGTLG AGMVLGREGP MVQMGGNSGR MIVDIFRLRS PEARHSLLAT
GAAAGLSAAF NAPLAGILFV IEEMRSQFRY SLVSIKAVFI GVITSTIVYR YFNGERAIIE
VGKLSDAPLN TLWLYLLLGI IFGAVGVIFN ALIFRTQDMF VRFHGGDWRK LVLIGGLLGG
MCGLLALLHG NAVGGGFALI PIAAAGNFSI GMLLFIFIAR VITTLLCFGS GAPGGIFAPM
LALGTILGTA FGLSCAHFFP QYGIEAGTFA IAGMGALFAA SVRAPLTGIV LVLEMTDNYQ
LILPMIVTCL GATLIAQFMG GKPLYSAILA RTLAKQEQAR ATVIAQEPAV ENTPQIGK