| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3449 |
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| Symbol | relA |
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| ID | 6087474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3783755 |
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| End bp | 3785989 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641598533 |
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| Product | GDP/GTP pyrophosphokinase |
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| Protein accession | YP_001722169 |
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| Protein GI | 170025664 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000378764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCGG TACGAAGTGC GCATTTAAAC CCAGCGGGTG AGTTTGCTCT TGACGATTGG
ATTGCCAGTT TAGGGCTTGC CAATCCGCAG TCATCTGAGC GATTAGCCGA AACCTGGCGT
TACTGTGAAC AACAGACGCA AAACCATCCC GATGCCTCGT TATTACTGTG GCGCGGTCTT
GAAATGGTTG AAATTCTTTC CACTCTGAGT ATGGATAACG ACAGTATGCG CGCGGCGCTG
CTGTTCCCGC TGGTAGACGC CAATATCGTG GACGAAACTA CCCTGACCGA GCAATTCGGT
AAGGGGATTA CGTATCTGGT ACACGGTGTG CGTGATATGG ATGCTATCCG CCAGTTAAAA
GCCACTCACA ACGATTCCAT GAGCTCGGAG CAAGTGGATA ACGTGCGCCG TATGTTATTG
GCGATGGTGG AGGATTTCCG CTGCGTGGTG ATCAAGCTGG CAGAGCGGAT CGCTCATCTG
CGTGAAGTCA AAGATGCACC GGAAGATGAA CGTGTTCTGG CGGCTAAAGA GTGTTCCAAT
ATTTACGCAC CACTGGCGAA CCGTTTGGGG ATTGGTCAGA TTAAATGGGA GTTGGAGGAT
TTCTGCTTCC GTTATCTGCA TCCAGATGAA TATAAGAAAA TCGCCAAATT ACTCCACGAG
AGGCGTATTG ATCGCGAACA ATTTATTGAT GACTTCGTTG CTTCATTACA TAAGGCGATG
GCTGACGAAG GCATTAAAGC CGACATTTAT GGCCGACCGA AGCATATCTA CAGCATTTGG
CGCAAAATGC AGAAAAAGTC GCTGGCCTTC GATGAGCTAT TCGACGTCCG CGCGGTGCGG
GTGGTGGTGG AACGCTTGCA GGATTGTTAT GCCGCGTTAG GGATTGTTCA CACGCACTTC
CGGCATTTAC CTGATGAATT TGATGATTAT GTGGCCAACC CTAAGCCAAA TGGTTACCAA
TCGATCCATA CCGTGGTGCT TGGGCCACGA GGTAAAACGT TAGAGATTCA GATCCGTACC
CGCCAGATGC ATGAAGATGC CGAGTTGGGG GTTGCTGCGC ACTGGAAATA TAAAGAAGGG
GCCGTGGCAG CGGGCCGTTC GAGTTATGAA GGGCGAATTG CCTGGTTACG TAAATTGATC
GCCTGGCAGG AAGAGATGGC TGATTCTGGC GAAATGCTGG ATGAAGTGCG CAGCCAGGTA
TTTGATGATC GGGTGTACGT GTTTACACCG AAAGGCGATG TGATTGACCT ACCTGCCGGC
TCGACGCCGC TGGATTTTGC CTACCATATT CATAGCGATG TGGGCCACCG TTGTATCGGT
GCCAAAATCA GTGGCCGCAT TGTGCCGTTT ACTTATCAGT TGCAGATGGG TGATCAAATT
GAAATTATCA CTCAAAAACA GCCAAACCCA AGCCGTGACT GGCTGAATCC TAACCTCGGT
TACATCACGA CCAGTCGCGG ACGTTCCAAA ATTCATAACT GGTTCCGCAA ACAAGATAGA
GATAAGAATA TTCTGGCTGG CCGGCAAATG CTGGATGATG AGCTGGAGCA TCTGGATATC
AGTCTGAAAG AGGCTGAGAA GCTGCTTGTT CCGCGTTACA ACATGAATTC GATGGATGAA
GTGTTAGCGG CGATTGGGGG GGGTGATATC CGTCTGAATC AGATGGTGAA CTTCCTCCAG
GGCAAACTGA ATAAACCAAC GGCAGAAGAG GCTGATTTAG AAGCACTCCG TCATCTGAAT
AACAAGCATC AGCCCGCGCC ACGTAACGCC AGCAAAGACA GTGGGCGTAT TGTGGTCGAA
GGTGTCGGTA ACCTGATGCA CCATATTGCC CGTTGTTGCC AGCCGATCCC CGGTGATCAA
ATTATCGGTT TTATCACGCA AGGGCGGGGG ATATCGATTC ACCGTGCAGA TTGTGAGCAG
TTGGCTGAAT TGGAATCCCA TGCACCGGAA CGGATTGTCG ATGCAGTCTG GGGCGAAAGC
TACTCCAGCG GTTATTCGCT GGTGGTGCGG GTTACGGCTA ATGACCGCAG TGGGTTATTG
CGCGATATCA CTACGATCCT GGCAAATGAG AAAGTTAACG TACTGGGCGT TGCCAGCCGC
AGCGATACCA AAAAGATGGT GGCGACTATC GATATGGATA TCGAGATCTA TAACTTGCAG
GTGCTGGGCC GGGTATTGGC CAAACTGAAT CAGTTGCCGG ATGTCATAGA CGCCCGTCGC
CTCCATGGCA ATTAG
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| Protein sequence | MVAVRSAHLN PAGEFALDDW IASLGLANPQ SSERLAETWR YCEQQTQNHP DASLLLWRGL
EMVEILSTLS MDNDSMRAAL LFPLVDANIV DETTLTEQFG KGITYLVHGV RDMDAIRQLK
ATHNDSMSSE QVDNVRRMLL AMVEDFRCVV IKLAERIAHL REVKDAPEDE RVLAAKECSN
IYAPLANRLG IGQIKWELED FCFRYLHPDE YKKIAKLLHE RRIDREQFID DFVASLHKAM
ADEGIKADIY GRPKHIYSIW RKMQKKSLAF DELFDVRAVR VVVERLQDCY AALGIVHTHF
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPR GKTLEIQIRT RQMHEDAELG VAAHWKYKEG
AVAAGRSSYE GRIAWLRKLI AWQEEMADSG EMLDEVRSQV FDDRVYVFTP KGDVIDLPAG
STPLDFAYHI HSDVGHRCIG AKISGRIVPF TYQLQMGDQI EIITQKQPNP SRDWLNPNLG
YITTSRGRSK IHNWFRKQDR DKNILAGRQM LDDELEHLDI SLKEAEKLLV PRYNMNSMDE
VLAAIGGGDI RLNQMVNFLQ GKLNKPTAEE ADLEALRHLN NKHQPAPRNA SKDSGRIVVE
GVGNLMHHIA RCCQPIPGDQ IIGFITQGRG ISIHRADCEQ LAELESHAPE RIVDAVWGES
YSSGYSLVVR VTANDRSGLL RDITTILANE KVNVLGVASR SDTKKMVATI DMDIEIYNLQ
VLGRVLAKLN QLPDVIDARR LHGN
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