Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3444 |
Symbol | |
ID | 6091166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3777715 |
End bp | 3778386 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598528 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001722164 |
Protein GI | 170025659 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTACC CGATTAATGA AATGTTCCAG ACGTTGCAGG GCGAGGGTTA TTTCACTGGC GTTCCAGCGA TTTTTGTTCG CTTGCAAGGT TGCCCGGTAG GTTGTAGCTG GTGTGACACC AAACATACCT GGGAAAAAGA AGCAGATCGG GAAGTCGATA TGCAGCGCAT TATGGTGAAA ACCGCAGAAA GTGATGCCTG GGGTTCAGCC AGTGAACAGC AACTGTTAGA TCTTTTCGCT CAGCAAGGGT ATACCGCCCG CCATGTGGTT ATCACGGGTG GTGAGCCATC CATTTACGAT CTCCAGCCCT TAACGTCACT GTTGGAGCAA GCTGGCTTCA GTTGCCAGAT TGAAACCAGT GGTACTCATG AAGTGCGGTG TTCTGCCCAG ACTTGGGTGA CCGTTTCACC AAAAGTGAAT ATGCGCGGTG GCCTAAAAAT ATTGTCACAG GCACTCCAGC GTGCGGATGA AATTAAGCAT CCGGTTGGCC GGTTACGAGA TATCGAAGCA TTAGAAGCGT TACTGGCGAC GTTGGATGAT GATAAAAAAC GGATTATTGC ACTGCAGCCG ATAAGCCAGA AAGAGGATGC GACCAAGTTG TGTATTGAGA CCTGCATCGC TAAGAACTGG CGGTTGTCGA TGCAGACACA TAAATATCTC AATATCGCTT GA
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Protein sequence | MLYPINEMFQ TLQGEGYFTG VPAIFVRLQG CPVGCSWCDT KHTWEKEADR EVDMQRIMVK TAESDAWGSA SEQQLLDLFA QQGYTARHVV ITGGEPSIYD LQPLTSLLEQ AGFSCQIETS GTHEVRCSAQ TWVTVSPKVN MRGGLKILSQ ALQRADEIKH PVGRLRDIEA LEALLATLDD DKKRIIALQP ISQKEDATKL CIETCIAKNW RLSMQTHKYL NIA
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