Gene YPK_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3444 
Symbol 
ID6091166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3777715 
End bp3778386 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content49% 
IMG OID641598528 
Productradical SAM domain-containing protein 
Protein accessionYP_001722164 
Protein GI170025659 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTACC CGATTAATGA AATGTTCCAG ACGTTGCAGG GCGAGGGTTA TTTCACTGGC 
GTTCCAGCGA TTTTTGTTCG CTTGCAAGGT TGCCCGGTAG GTTGTAGCTG GTGTGACACC
AAACATACCT GGGAAAAAGA AGCAGATCGG GAAGTCGATA TGCAGCGCAT TATGGTGAAA
ACCGCAGAAA GTGATGCCTG GGGTTCAGCC AGTGAACAGC AACTGTTAGA TCTTTTCGCT
CAGCAAGGGT ATACCGCCCG CCATGTGGTT ATCACGGGTG GTGAGCCATC CATTTACGAT
CTCCAGCCCT TAACGTCACT GTTGGAGCAA GCTGGCTTCA GTTGCCAGAT TGAAACCAGT
GGTACTCATG AAGTGCGGTG TTCTGCCCAG ACTTGGGTGA CCGTTTCACC AAAAGTGAAT
ATGCGCGGTG GCCTAAAAAT ATTGTCACAG GCACTCCAGC GTGCGGATGA AATTAAGCAT
CCGGTTGGCC GGTTACGAGA TATCGAAGCA TTAGAAGCGT TACTGGCGAC GTTGGATGAT
GATAAAAAAC GGATTATTGC ACTGCAGCCG ATAAGCCAGA AAGAGGATGC GACCAAGTTG
TGTATTGAGA CCTGCATCGC TAAGAACTGG CGGTTGTCGA TGCAGACACA TAAATATCTC
AATATCGCTT GA
 
Protein sequence
MLYPINEMFQ TLQGEGYFTG VPAIFVRLQG CPVGCSWCDT KHTWEKEADR EVDMQRIMVK 
TAESDAWGSA SEQQLLDLFA QQGYTARHVV ITGGEPSIYD LQPLTSLLEQ AGFSCQIETS
GTHEVRCSAQ TWVTVSPKVN MRGGLKILSQ ALQRADEIKH PVGRLRDIEA LEALLATLDD
DKKRIIALQP ISQKEDATKL CIETCIAKNW RLSMQTHKYL NIA