| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3443 |
|---|
| Symbol | |
|---|
| ID | 6091145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3777122 |
|---|
| End bp | 3777481 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641598527 |
|---|
| Product | queuosine biosynthesis protein QueD |
|---|
| Protein accession | YP_001722163 |
|---|
| Protein GI | 170025658 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
|---|
| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA CCCTATTTAA AGATTTTCAG TTTGAGGCGG CACATCGGTT ACCGCATGTT
CCTGAAGGCC ATAAATGTGG CCGTTTACAC GGTCACTCAT TTATGGTTCG TTTGGAAGTT
ACGGGTGAAG TTGATGCTCA CTCTGGCTGG GTGATGGATT TTGCCGCCCT AAAAGCCGTG
TTTCAACCCA TTTGGGAACG TCTTGATCAT CATTATCTGA ACGATATTCC TGGCTTGGAA
AACCCAACCA GCGAAGTTTT AGCCCGTTGG ATTTGGCAAC AACTTAAACC CCAATTGTCA
GAACTCAGTG CGGTGATGAT CAAAGAGACC TGCTCTGCTG GCTGCGTTTA TCGCGGGTAA
|
|---|
| Protein sequence | MSTTLFKDFQ FEAAHRLPHV PEGHKCGRLH GHSFMVRLEV TGEVDAHSGW VMDFAALKAV
FQPIWERLDH HYLNDIPGLE NPTSEVLARW IWQQLKPQLS ELSAVMIKET CSAGCVYRG
|
|---|
| |