Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3427 |
Symbol | pcm |
ID | 6090126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3761397 |
End bp | 3762023 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598511 |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_001722147 |
Protein GI | 170025642 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0283834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAATA AACGCATGCA AACATTGTTG ATGCAGTTAC GTCAGCAAGG TATTCACGAC GAACGCCTGT TACAGGCGAT CGAAGCGGTA CCGCGTGAGC GTTTTGTCGA TGAAGCGTTG GCTCATAAGG CTTATGAGAA TACCGCTCTC CCTATAGGTG CGGGTCAAAC GATTTCTCAG CCTTATATGG TGGCGCGAAT GACAGAGTTA CTGCAATTGA CGCCAACGTC CAGAGTCTTA GAGATCGGAA CGGGGTCAGG CTACCAGACG GCTATTTTGG CGCATCTGGT CGATCATGTC TGTTCAGTCG AGCGAATCAA AGGGTTACAG TGGCAGGCAA AACGTCGCCT AAAACAGTTG GATCTGCATA ATGTGTCGAC CCGCCATGGT GATGGTTGGT TAGGCTGGCA GTCTCGTGGG CCGTTTGATG CCATTATTGT AACCGCAGCA CCGCCTGAAA TTCCGGATGC ATTACTTGAG CAATTGGATG AAGGGGGAAT ACTGGTTCTT CCCGTTGGTG AGCAGTTCCA AACATTAAAG TACGTGCAAC GTCGTAACAA TGAATACCAT ATTGAGACGG TGGAAGCTGT CCGTTTTGTT CCTCTGGTTA AAGGGGAACT TGCCTAA
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Protein sequence | MVNKRMQTLL MQLRQQGIHD ERLLQAIEAV PRERFVDEAL AHKAYENTAL PIGAGQTISQ PYMVARMTEL LQLTPTSRVL EIGTGSGYQT AILAHLVDHV CSVERIKGLQ WQAKRRLKQL DLHNVSTRHG DGWLGWQSRG PFDAIIVTAA PPEIPDALLE QLDEGGILVL PVGEQFQTLK YVQRRNNEYH IETVEAVRFV PLVKGELA
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