Gene YPK_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3403 
Symbol 
ID6090362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3734396 
End bp3735892 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content52% 
IMG OID641598487 
Productcarbohydrate kinase FGGY 
Protein accessionYP_001722123 
Protein GI170025618 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACT ATTTTCTCGG CATTGATCTG GGCGGTACCG TGACCAAAGC CGGTATTTAT 
ACCGCCGACG GCAGCGAAAT TGCCGTTACT GAACAGGCAC TCCCGGTACT TAGCCCACAA
GCGGGATTCT GTGAGCGCGA TATGGAGGCC CTGTGGATCG CCACCTGTCA GGTGATCCGC
CAAACGCTGA ACAAGGCATG TGCTTTATCG GAATATCATA TTGCGGCAGA GAACATCGGT
GGCATCAGTT TCTCTGCCCA TGGCAAAGGG TTATATCTGG TGGATAAACA GGGGCTGCCG
GTACGTAACG GAATTGTTTC CTCCGATTCC CGTGCACAGA AACTGGTTAA CCGTTGGCAG
CAAGAAGGTA AAGATCACGC CGCCTATGAA CGTAGCCTGC AACAACTGTG GCCATCCCAT
CCCGCAGCCC TCTTGCGTTG GTTAAAGGAA AACGAGCCAG AAAACTATCA GCGCAGCGGT
TATGTGCTCA TGGTCCATGA CTATATCCGT TACCGTCTAA CGGGTGAGTT TACTATTGAA
GAAACCAATA TTTCTGGCAG CAATCTTTAT AATCAATACA ACGGCAGTTT TGATCCGCAA
CTAATGGCGA TTTTTGCCAT TGAGGAAGTC ATGGAGAAAA CCGCGCCGAT TATCGGTTCA
GCCGATTTAG CAGGTCATGT CAGTGAAGAT GCGGCTAACG CCTGTGGGCT GAAAGCAGGA
ACACCGGTGT TCGGCGGCAT GTTTGATGTG GTCGGTGCGG CACTGACTTC TGGTTTACAC
GACAGCCGCC AACTCAGTGC GGTGGCGGGT ACTTGGTCAA TCGCCACCCG TATTTTTGAG
GCGATCACCC CCTCCGAATA CCCCTATGTT TGGGGGAAAT ATTGCATCCC CGGCACCTAC
TTCGTGCATG AAGGCAGCCC AACCTCGGCC AGTAACCTTG CCTGGTTCGT GAAACAATTT
CTCCCTGAAC TGCCAAATAG CTACCAGACC CTGAATCAGT GGGCGGCTTT GGGCTATGAA
AAATCTGAAG ATATTCTGTT TTTCCCTTGG CTATACGGCT CCAACCACAG TGCTAATCTT
AGCGGAGGCC TGCTTGGGTT AAGTGGGCAT CACAATATCG AAGACATTGT GTACGCCATT
TATCAGGGAG TGGTTTTTTC ACATCTTCTG CATCAGGACA AGATTTTGGC GTTGGATGAC
ACCATCGACT GTATCCGCTT TACCGGTGGC CCGACACATT CCGCTATTTG GATGCAGATG
TTCTGCGATG CCAGTAATTT GCCACTGGAA ATTGTCGATA TTCAGCAATC CGGCTGCCGG
GCAGCGGCGC TGTGTGCGGC GGTGGGGAGC CACTATTACC ACGGGTTTGA AGAGGCGATC
CGCGCCTGCC CGCCCCCTAT CACCCGCCTG CTCCCCAATG CTGAAAAACA TCAGCGATTA
CGGGCGCGTT TTGACAAATT CAAACAGGTC GCTGAAGCGC TCAGCACGGT AATGTAA
 
Protein sequence
MSHYFLGIDL GGTVTKAGIY TADGSEIAVT EQALPVLSPQ AGFCERDMEA LWIATCQVIR 
QTLNKACALS EYHIAAENIG GISFSAHGKG LYLVDKQGLP VRNGIVSSDS RAQKLVNRWQ
QEGKDHAAYE RSLQQLWPSH PAALLRWLKE NEPENYQRSG YVLMVHDYIR YRLTGEFTIE
ETNISGSNLY NQYNGSFDPQ LMAIFAIEEV MEKTAPIIGS ADLAGHVSED AANACGLKAG
TPVFGGMFDV VGAALTSGLH DSRQLSAVAG TWSIATRIFE AITPSEYPYV WGKYCIPGTY
FVHEGSPTSA SNLAWFVKQF LPELPNSYQT LNQWAALGYE KSEDILFFPW LYGSNHSANL
SGGLLGLSGH HNIEDIVYAI YQGVVFSHLL HQDKILALDD TIDCIRFTGG PTHSAIWMQM
FCDASNLPLE IVDIQQSGCR AAALCAAVGS HYYHGFEEAI RACPPPITRL LPNAEKHQRL
RARFDKFKQV AEALSTVM