Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3380 |
Symbol | |
ID | 6089884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3707503 |
End bp | 3708927 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598464 |
Product | L-fucose isomerase-like protein |
Protein accession | YP_001722100 |
Protein GI | 170025595 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2407] L-fucose isomerase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCAA TACCTCGCAA GTTAACTTTT GCGGTGATTA TCGGCAATCG GGGTTTCTTC CCAAGCTATC TGGTGAGCGA CGCGCGCCGG GATGCTCAGG CGCTCTTTGA CCGGCTGGGG ATTAACATCA TTATGCTTAA TGAAGAGCAA ACGCCACTGG GAGGTGTGGA AAATTGGCGT GATGCCAAGG TGTGCGCTGA ATTATTCCGT CAACACAGTG AAGAGATCCA CGGTGTGGTT GTTATTCTGC CCAATTTTGG CGATGAGAAA AGTGTCTCTG ATGCGATCCG TTTATCTGGC CTGAAAGTGC CGGTCCTGGT GCAGGCAGAA GAAGATGCGC TGGATAAAAT GGGGCTGGCA ACCCGCCGTG ACAGTTTCTG CGGCAAGATT TCATTGTGTA ATAACCTACG CCAATACGGC ATTCCTTTCA CCTTGACCAA ACAGCATGTC TGTAGCCTGA ACAGTGAGAT ATTCAGCCGC GATGTCGAGC AATTTGTGCA GTTGTGTCGT GTCGTACATG CCATGAAACG GGTACGGGTT GGGGCTATTG GTGCCCGTCC GACCAATTTT AATACTGTAC GCTACAGTGA GAAGTTATTG GAGAATTTGG GGATCACCGT AGAAACCCTC GATTTATCCG AGGTGTTTTT CCGGGTGGCT AATCTCAGTG ATAACGATAT CCGCGTCGGC GAAAAACTGG CATTACTGAA AGCCAATGGG GATACCAGCA CTATCCCACA AGACAAACTG CATAAAATGG CGAAGTTGTT TGTGGTGATC AGTGAATGGA TTATTGCTAA TGATATTGAT ACCACGGCGA TGCAATGTTG GACGTCGCTG CAGCAGAACT TGGGAATCAA CGTCTGTTCC ATTATGAGCG TAATGTCGGG GCAATTGATG CCAAGTGCCT GTGAAGTGGA TGTGATGGGC GCGTTATCGA TGTATGCGTT GGCCAGTTGC TCGCTGGCAC CGGCATCCAT CGCCGACTGG AATAATAACT TTGGCGCTGA ACGAGATAAA TGTGTGCTAT TCCACTGCGG CAACTTTGCC AGTGAAAGTC TGGAGAGCTC AACTATGGGC ACCGCTGATA TTATCGGGAC AACGGTGGGG TGTGAGAATA CCTGTGGCGC AGTTCATGGC CGGATGAAGT CGGGGCCATT GACCTATTTC CGCCTCTCTT CTGATGATTT TACGGGGCAG GTCCGGGCTT ATGTTGGCGA AGGGCGCTCT GTCAGTGACG AGTTGAATAC AGTGGGCTGT CGGGCCGTGG TGGAAGTACC ACAGTTGGAA AGTTTGCTCA CGCATATTTG CAACAACGGT TTTGAACACC ATGTGGCCAT GAACCATTCA GCTACAGCTC AGGTTTTGCA AGAAGCATTC AGTAAATATC TGGGCGTTGA TTGCTACTGG CATGGGAAGC CGTGA
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Protein sequence | MSAIPRKLTF AVIIGNRGFF PSYLVSDARR DAQALFDRLG INIIMLNEEQ TPLGGVENWR DAKVCAELFR QHSEEIHGVV VILPNFGDEK SVSDAIRLSG LKVPVLVQAE EDALDKMGLA TRRDSFCGKI SLCNNLRQYG IPFTLTKQHV CSLNSEIFSR DVEQFVQLCR VVHAMKRVRV GAIGARPTNF NTVRYSEKLL ENLGITVETL DLSEVFFRVA NLSDNDIRVG EKLALLKANG DTSTIPQDKL HKMAKLFVVI SEWIIANDID TTAMQCWTSL QQNLGINVCS IMSVMSGQLM PSACEVDVMG ALSMYALASC SLAPASIADW NNNFGAERDK CVLFHCGNFA SESLESSTMG TADIIGTTVG CENTCGAVHG RMKSGPLTYF RLSSDDFTGQ VRAYVGEGRS VSDELNTVGC RAVVEVPQLE SLLTHICNNG FEHHVAMNHS ATAQVLQEAF SKYLGVDCYW HGKP
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