Gene YPK_3375 details

Gene Information

• Locus tag: YPK_3375
• Symbol: recA
• ID: 6089603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 3702759
• End bp: 3703829
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641598459
• Product: recombinase A
• Protein accession: YP_001722095
• Protein GI: 170025590
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02012] protein RecA

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.376283
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATTG ATGAGAATAA ACAAAAGGCG TTAGCAGCAG CACTGGGCCA AATTGAAAAA 
CAATTCGGTA AAGGCTCTAT TATGCGCCTT GGCGAAGACC GCTCAATGGA TGTTGAAACC 
ATCTCTACCG GCTCCCTTTC CCTTGATATT GCACTGGGGG CTGGTGGCTT ACCAATGGGG 
CGTATCGTTG AGATTTATGG CCCAGAATCA TCAGGTAAGA CGACACTGAC ATTACAGGTT 
ATCGCCGCCG CACAGCGTGA AGGCAAAACG TGTGCATTTA TCGATGCCGA ACATGCCCTT 
GACCCAATCT ATGCCAAGAA ATTGGGTGTA GATATTGATA ACCTATTGTG TTCTCAGCCA 
GATACTGGCG AGCAGGCACT GGAAATTTGT GATGCGCTGA CTCGCTCTGG TGCGGTTGAC 
GTTATCATCG TTGACTCCGT AGCGGCATTG ACACCAAAAG CTGAAATTGA AGGTGAAATT 
GGCGATTCTC ATATGGGCCT TGCCGCGCGT ATGATGAGCC AGGCTATGCG TAAGCTGGCG 
GGTAACCTGA AGAATGCGAA TACCTTACTG ATTTTTATCA ACCAAATCCG CATGAAAATT 
GGCGTGATGT TTGGTAACCC AGAAACCACT ACCGGTGGCA ACGCTCTTAA ATTTTACGCT 
TCTGTACGTT TGGATATCCG CCGTATTGGT GCAGTAAAAG ATGGTGATGT GGTCGTGGGG 
AGTGAAACCC GCGTTAAAGT CGTTAAAAAC AAGATTGCTG CGCCATTCAA ACAAGCTGAA 
TTCCAGATCC TCTACGGTGA AGGCATTAAT ATCAACGGTG AACTGGTTGA CTTAGGTGTT 
AAACACAAAC TGATTGAGAA AGCTGGCGCA TGGTATAGCT ATAACGGTGA TAAAATTGGT 
CAGGGTAAAG CCAATGCCAG CAACTATTTA AAAGAAAACC CAGCCATTGC TGCTGAGTTA 
GATAAAAAAC TGCGTGAAAT GCTACTTAAT GGCGGCAATG GTGAACAACC TGTTGCTGCG 
GCAACAGCAG AATTCGCCGA TGGTGCAGAT GAAACCAACG AAGAATTTTA A 

 

Protein sequence

MAIDENKQKA LAAALGQIEK QFGKGSIMRL GEDRSMDVET ISTGSLSLDI ALGAGGLPMG 
RIVEIYGPES SGKTTLTLQV IAAAQREGKT CAFIDAEHAL DPIYAKKLGV DIDNLLCSQP 
DTGEQALEIC DALTRSGAVD VIIVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA 
GNLKNANTLL IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRIG AVKDGDVVVG 
SETRVKVVKN KIAAPFKQAE FQILYGEGIN INGELVDLGV KHKLIEKAGA WYSYNGDKIG 
QGKANASNYL KENPAIAAEL DKKLREMLLN GGNGEQPVAA ATAEFADGAD ETNEEF