Gene YPK_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3370 
Symbol 
ID6087338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3696317 
End bp3696745 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID641598449 
Producthypothetical protein 
Protein accessionYP_001722090 
Protein GI170025585 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000974791 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAATA CTCTTGCAAT TGCTTCATTA TTCGGGAGTA GCTTTCTCAG TGCGACGCTC 
TTACCCGGCA ATTCTGAAAT TCTGTTGGTC ACCCTATTAA CTGCGGGTAG TGCGCCCGCA
GCGATATTGG TGTTATCTGC TACTGTCGGA AACACCCTAG GGGGATTAAC CAATGTTGTT
ATAGGTCGTT TATTACCGGA ATTAAAGCCA CAGCGTGGTA TGGGGGTGGC ACTTGGCTGG
CTCCAACGCT TCGGTCCGGC AGCTCTGTTA TTAAGCTGGT TACCGATAGT AGGCGATTTG
ATGTGCGTGT TGGCAGGCTG GTTGCGTATG CCTTGGGGTT TTGTGGCTTT TTTCTTATTT
TTGGGAAAAG CATTGCGTTA CATCGTGTTA ACGATGATTA CGTTGCAAGG GATCGCTTGG
TGGCAATAA
 
Protein sequence
MSNTLAIASL FGSSFLSATL LPGNSEILLV TLLTAGSAPA AILVLSATVG NTLGGLTNVV 
IGRLLPELKP QRGMGVALGW LQRFGPAALL LSWLPIVGDL MCVLAGWLRM PWGFVAFFLF
LGKALRYIVL TMITLQGIAW WQ