Gene YPK_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3356 
SymboltyrA 
ID6090605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3681698 
End bp3682819 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content49% 
IMG OID641598435 
Productbifunctional chorismate mutase/prephenate dehydrogenase 
Protein accessionYP_001722076 
Protein GI170025571 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01799] chorismate mutase domain of T-protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGCTG AACTGACTGC TTTACGCGAT CAAATTGATG AAGTCGATAA AGCGTTGTTG 
GATTTGCTGG CTAAACGCCT GCATTTGGTG GCTGAAGTCG GTGAAGTAAA AAGCCGTTAT
GGCTTGCCGA TATATGTTCC GGATCGTGAG GCGGCAATGC TGGCCTCACG CCGGCAAGAA
GCCGGGGCAC TAGGTGTTCC GCCGGATTTA ATTGAAGATG TGCTACGTCG GGTGATGCGG
GAATCTTATA CCAGCGAAAA TGATAAAGGC TTCAAGACAT TATGCCCGGA ACTGCGTCCA
GTGGTTATCA TTGGTGGCCA AGGGCAGATG GGTCGGTTAT TTAGCCGGAT GCTTAATCTG
TCTGGTTATC AGGTGAGAAC ACTGGAGCAA GAAGATTGGC CACAAGCTGA ATCTATTCTG
GCTGATGCCG GGATGGTGAT TGTGAGTGTC CCCATCCATA TCACTGAAGA GGTGATTAAT
CGGCTACCCA AATTACCAGC AGATTGTATT TTGCTGGATT TGGCCTCGGT AAAAAATAAA
CCCCTGCAAG CTATGCTGGC AGCCCATGAA GGGCCAGTTT TGGGGTTGCA TCCAATGTTT
GGCCCTGATG TCGGCAGCTT GGCGAAGCAA GTCGTGGTGT ATTGTGATGG ACGCGATCCA
CAGGCGTATC AGTGGTTACT GGAGCAGCTA CAGGTCTGGG GAGCAAGATT GCACCGTATC
AGCGCAGTCG AACATGACCA AAACATGGCG TTCATTCAGG CTCTGAGGCA TTTTGCGACT
TTTGCGTACG GATTACATCT GGCGGAAGAA AACGTGCAAT TGGAACAATT ACTGGCACTG
TCTTCACCGA TTTATCGCCT GGAGCTGGCG ATGGTTGGGC GGCTATTTGC ACAAGATCCA
CAGCTTTACG CTGATATCAT TATGTCGTCG GAAGATAATC TGGCGCTGAT TAAACGTTAC
TACAAACGCT TTGGTGAGGC GCTCACCTTG TTAGAGCACC ATGATAAACA AGCGTTTGTT
CAAAGTTTCG AGAAAGTAGA ACACTGGTTT GGTGATTACG CGGAACGTTT CTTGGTAGAG
AGCCGTTCAT TACTGCGTCA GGCGAACGAT AATCGTCAGT AG
 
Protein sequence
MVAELTALRD QIDEVDKALL DLLAKRLHLV AEVGEVKSRY GLPIYVPDRE AAMLASRRQE 
AGALGVPPDL IEDVLRRVMR ESYTSENDKG FKTLCPELRP VVIIGGQGQM GRLFSRMLNL
SGYQVRTLEQ EDWPQAESIL ADAGMVIVSV PIHITEEVIN RLPKLPADCI LLDLASVKNK
PLQAMLAAHE GPVLGLHPMF GPDVGSLAKQ VVVYCDGRDP QAYQWLLEQL QVWGARLHRI
SAVEHDQNMA FIQALRHFAT FAYGLHLAEE NVQLEQLLAL SSPIYRLELA MVGRLFAQDP
QLYADIIMSS EDNLALIKRY YKRFGEALTL LEHHDKQAFV QSFEKVEHWF GDYAERFLVE
SRSLLRQAND NRQ