Gene YPK_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3350 
Symbol 
ID6087402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3676780 
End bp3677511 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID641598429 
Producthypothetical protein 
Protein accessionYP_001722070 
Protein GI170025565 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0329886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAC TGATACTGCC CGATTGGCCG ATGCCTGCCC GCGTCCGGGC TTGTAGCACC 
ACTCGTCATG GTGGTGTCAG TGTGTCGCCT TATGATTCAT TAAACCTTGG TACGCATGTG
GGCGATGTTG CTACCCATGT GGACGCCAAT CGCCAACTTC TACGGGAACA AGCCTGCCTA
CCACAAATGC CCGTTTGGCT GGATCAGGTA CACGGTACCC GAGTCCTAAC ACTTGAGGGG
CGTTCGGTAT CTAATACACA AGCTGATGCG GTGTATAGCC GAGTGGCAGG GCAAGTCTGC
GCGGTCATGA CAGCAGACTG TTTGCCGGTC CTGTTCTGCT CCTTAGCGGG TGATGAAGTG
GCTGCAGCCC ATGCAGGGTG GCGTGGTTTA TGTTCTGGTG TTCTGGAACA CACGGTGGCG
CAATTCAATG CGGCACCGTC CTCTCTTATG GCTTGGTTAG GTCCTGCGAT TGGTCCTCAG
CAGTTCGAGG TCGGTGAAGA TGTAAAACAG GCATTTATCA GTATCGATGC TAAATCAGCT
TTGGCATTTA CCCCTTTCGG TTCTAAATAC CTCGCCGATA TCTATCTATT AGCGCGTTTG
CGGCTACAGG CGGCGGGTAT CCAAGCTATC TATGGCGGTA ATCGCTGTAC TGTGACTGAA
AAACAACAAT TTTTTTCTTA TCGGCGTGAT GGTATCACCG GGCGTATGGC AAGTTTAATC
TGGCTAATAT AA
 
Protein sequence
MSTLILPDWP MPARVRACST TRHGGVSVSP YDSLNLGTHV GDVATHVDAN RQLLREQACL 
PQMPVWLDQV HGTRVLTLEG RSVSNTQADA VYSRVAGQVC AVMTADCLPV LFCSLAGDEV
AAAHAGWRGL CSGVLEHTVA QFNAAPSSLM AWLGPAIGPQ QFEVGEDVKQ AFISIDAKSA
LAFTPFGSKY LADIYLLARL RLQAAGIQAI YGGNRCTVTE KQQFFSYRRD GITGRMASLI
WLI