Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3342 |
Symbol | |
ID | 6090814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3662549 |
End bp | 3663235 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641598419 |
Product | DTW domain-containing protein |
Protein accession | YP_001722064 |
Protein GI | 170025559 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.342433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGACA CATTCACCAC TGGCCATACT TTACCTACGG CCATAACGAC GGAAAATGCA GTCCTGCGTT TACGCCAACA ACGTTTAGCC GCCGCCACCC GTGCGTATCG TGCCCGCGGC TGCCGGGCCA TCCGTTGCCA AAGCTGCCTG CTGGCCGAGC GTTTCTGCCT GTGTGATACC ATCAAGCCAC AACAGGCAAA CAGCCGATTT TGCCTAATTA TGTTTGATAC CGAGCCACTC AAGCCCAGTA ATACCGGCCG CCTTATCGCG GATATCCTGC CCGATACACA CGCTTTTCTC TGGGCGCGAA CCGAAGTCGA TCCTGAGCTA TTAGCCGCTA TCAGTGACCC TCTGCGTCAA CCTTATGTGG TTTTTCCTGA GGCCTATGCT GAACCAGAAC GGCAAGTGAT CAATCAATTA CCCATCAGCG ATAAACCGCC GCTATTTATT TTGCTGGACG GTACCTGGAC TGAAGCCAAG AAGATGTTCC GTAAAAGCCC CTATCTTGCC GGGTTACCCC TGCTGTCCTT GCAGGTCAGC CATCTATCCG ATTATCAATT ACGGGAAGCG CAGCGCCCTG AACAACATTG TACTGTCGAA GTCGCCACCG CGCTGCTCCA CCAAGCGGGT GATATACAAG CCGCAGAAGG GCTACGCGAT CACTTTCACT ACTTTCGTCA GCAATAA
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Protein sequence | MTDTFTTGHT LPTAITTENA VLRLRQQRLA AATRAYRARG CRAIRCQSCL LAERFCLCDT IKPQQANSRF CLIMFDTEPL KPSNTGRLIA DILPDTHAFL WARTEVDPEL LAAISDPLRQ PYVVFPEAYA EPERQVINQL PISDKPPLFI LLDGTWTEAK KMFRKSPYLA GLPLLSLQVS HLSDYQLREA QRPEQHCTVE VATALLHQAG DIQAAEGLRD HFHYFRQQ
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