Gene YPK_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3342 
Symbol 
ID6090814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3662549 
End bp3663235 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID641598419 
ProductDTW domain-containing protein 
Protein accessionYP_001722064 
Protein GI170025559 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.342433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGACA CATTCACCAC TGGCCATACT TTACCTACGG CCATAACGAC GGAAAATGCA 
GTCCTGCGTT TACGCCAACA ACGTTTAGCC GCCGCCACCC GTGCGTATCG TGCCCGCGGC
TGCCGGGCCA TCCGTTGCCA AAGCTGCCTG CTGGCCGAGC GTTTCTGCCT GTGTGATACC
ATCAAGCCAC AACAGGCAAA CAGCCGATTT TGCCTAATTA TGTTTGATAC CGAGCCACTC
AAGCCCAGTA ATACCGGCCG CCTTATCGCG GATATCCTGC CCGATACACA CGCTTTTCTC
TGGGCGCGAA CCGAAGTCGA TCCTGAGCTA TTAGCCGCTA TCAGTGACCC TCTGCGTCAA
CCTTATGTGG TTTTTCCTGA GGCCTATGCT GAACCAGAAC GGCAAGTGAT CAATCAATTA
CCCATCAGCG ATAAACCGCC GCTATTTATT TTGCTGGACG GTACCTGGAC TGAAGCCAAG
AAGATGTTCC GTAAAAGCCC CTATCTTGCC GGGTTACCCC TGCTGTCCTT GCAGGTCAGC
CATCTATCCG ATTATCAATT ACGGGAAGCG CAGCGCCCTG AACAACATTG TACTGTCGAA
GTCGCCACCG CGCTGCTCCA CCAAGCGGGT GATATACAAG CCGCAGAAGG GCTACGCGAT
CACTTTCACT ACTTTCGTCA GCAATAA
 
Protein sequence
MTDTFTTGHT LPTAITTENA VLRLRQQRLA AATRAYRARG CRAIRCQSCL LAERFCLCDT 
IKPQQANSRF CLIMFDTEPL KPSNTGRLIA DILPDTHAFL WARTEVDPEL LAAISDPLRQ
PYVVFPEAYA EPERQVINQL PISDKPPLFI LLDGTWTEAK KMFRKSPYLA GLPLLSLQVS
HLSDYQLREA QRPEQHCTVE VATALLHQAG DIQAAEGLRD HFHYFRQQ