| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3328 |
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| Symbol | |
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| ID | 6089322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3648834 |
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| End bp | 3649502 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641598405 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001722050 |
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| Protein GI | 170025545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTATC AGCTAAATTT TGCTGCTCTG TGGCCTTATT TGCCCGAATT ACTGTCGGGT
CTGCTGACCA CCATTGAGCT GACGGTTATG GCGACCATCG GGGGCATTGC ATTGGGGATC
TGCGGGGCTG CGATCCGCTG TGGCAACACC GTGATATTGC GGCGTCTCTG GGGAGGTTAT
GTGGAAATTG TCCGTAACAC CCCGTTTGTC GTGCAACTAT TTTTCATCGT TTTTGGTCTA
CCGGCGCTGG GGCTAAAGTT AAGTGCCGGG CAGGCCGCCC TGCTGGCGAT GACAATCAAT
CTGGGCGCTT ACAGCACGGA GATTATCCGT TCGGGCATTC AGGCCAGTGC CAAAGGCCAA
TGGGAGGCCG CGCGGGTTCT GGGCTTGAGC CGTAGCCAGA CCTTTTTCCG CGTGATCCTG
CCGCCGTCAT TGCAGCGGAT TTATCCGGCG CTGGTCAGTC AATGCATCAT TGTTATGCTC
GGTTCAGCCG TGGTGTCACA AGTTTCATTT GAAGAACTGA CCTTCGCCGC CAATCTTATT
CAGTCGCGGA CTTTCCTCAG TTTTGAGGTC TATCTGGTGA CCACCTTGCT GTATTTGTTG
TTCGCTATCG TGATGCGCCA GCTATTGCTG GCGGCCGGGC GTCGATACTT TGGGAGCCAT
GCCTCATGA
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| Protein sequence | MTYQLNFAAL WPYLPELLSG LLTTIELTVM ATIGGIALGI CGAAIRCGNT VILRRLWGGY
VEIVRNTPFV VQLFFIVFGL PALGLKLSAG QAALLAMTIN LGAYSTEIIR SGIQASAKGQ
WEAARVLGLS RSQTFFRVIL PPSLQRIYPA LVSQCIIVML GSAVVSQVSF EELTFAANLI
QSRTFLSFEV YLVTTLLYLL FAIVMRQLLL AAGRRYFGSH AS
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