Gene YPK_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3323 
Symbol 
ID6088831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3643326 
End bp3644096 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content52% 
IMG OID641598400 
Producthypothetical protein 
Protein accessionYP_001722045 
Protein GI170025540 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTT TAAAACTGAC GTTATTGCAA CAGCCGCTGG TCTGGTTGGA TGCACCCGCT 
AACTTTCGCC ATTTTGAGAC GCTACTTGCG CCGTTATCGT CGCGTGATGT GATTGTGTTA
CCGGAAATGT TTACGACCGG TTTTGCCATG AATGCCGCTG AGCATGCACC GCCAGAAGCG
GAAGTTAGCG CGTGGTTAGT GCATTGGGCC ACCCACACCA ATGCGCTGAT TGGCGGCAGT
GTGGCTCTGA TGACACCAGA AGGCGCGGTT AACCGTTTCC TGTTAGCGGA ACCAGGTGGG
CGTATCCATC ATTATGATAA ACGCCATTTA TTCCGCATGG CCGGTGAACA CCATCACTAT
CAGGCAGGCT CTGAGCGTAA AGTCGTGGAG TGGCGCGGCT GGCGAATTTT CCCTCAAATC
TGTTATGACC TGCGCTTTCC GGTCTGGTCA CGGAATCAGC AAGATTATGA TTTAGCGCTG
TATGTGGCTA ACTGGCCGAC CAAGCGAACT CAACACTGGC AAACATTATT GGCCGCTCGC
GCCATTGAAA ATCAGGCTTA TGTCGCCGGT TGTAACCGGG TTGGTGATGA TGATAACGGC
CATCATTATC AGGGCGATAG TCTGATTTTG GATGCGCAAG GTGAAGTTTT GGCCCAGGCC
GCACCGGGGC AGGCGGCACA ATTAGAAGCT GAATTGTCTT TAGAGGCGTT GCAGCATTAT
CGTGAGGGGT TTCCTGCCTG GCGCGATGCC GACCCTTTTA AGCTGTTATA A
 
Protein sequence
MSTLKLTLLQ QPLVWLDAPA NFRHFETLLA PLSSRDVIVL PEMFTTGFAM NAAEHAPPEA 
EVSAWLVHWA THTNALIGGS VALMTPEGAV NRFLLAEPGG RIHHYDKRHL FRMAGEHHHY
QAGSERKVVE WRGWRIFPQI CYDLRFPVWS RNQQDYDLAL YVANWPTKRT QHWQTLLAAR
AIENQAYVAG CNRVGDDDNG HHYQGDSLIL DAQGEVLAQA APGQAAQLEA ELSLEALQHY
REGFPAWRDA DPFKLL