Gene YPK_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3319 
Symbol 
ID6087585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3640016 
End bp3640558 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content50% 
IMG OID641598396 
Productacireductone dioxygenase ARD 
Protein accessionYP_001722041 
Protein GI170025536 
COG category[S] Function unknown 
COG ID[COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAT TAACGATTTT TAGCGACCAG CAGCCAGAAA AACCGTTGTG GCAGAGCCAT 
GATGCTGAAG AAATTCAACA GCAGTTGACG GCTATCGGGG TGCGCTTTGA GCGCTGGCAG
GCAGATTGTG AACTGGGTGA GAACCCACAG CCAGAGGCCG TTATTGCGGC TTATCAGCAT
GAGATTGATC GGCTGGTGGC AGAAAATGGC TATAAGAGCT GGGATGTGAT CAGTATGCGC
CCCGATAATC CTCAACGTGA AGCACTGCGA GAGAAATTTT TATCTGAGCA TACCCACGGC
GAAGATGAAG TGCGTTTTTT TGTTGAAGGT AGCGGGCTGT TCTGTTTGCA TCTAAACGAG
AAGGTTTACC AGATTCTGTG CGAAAAAAAT GATCTGTTAT CCGTCCCGGC GGATATCCCT
CATTGGTTCG ATATGGGGTC GGCACCCAAT TTCACGGCTA TCCGCGTGTT CGATAACCCG
GAAGGCTGGA TAGCACGTTC TACCGGCGAT AATATTGCCG ACGGCTATCC TCGCCTCGCC
TAA
 
Protein sequence
MSGLTIFSDQ QPEKPLWQSH DAEEIQQQLT AIGVRFERWQ ADCELGENPQ PEAVIAAYQH 
EIDRLVAENG YKSWDVISMR PDNPQREALR EKFLSEHTHG EDEVRFFVEG SGLFCLHLNE
KVYQILCEKN DLLSVPADIP HWFDMGSAPN FTAIRVFDNP EGWIARSTGD NIADGYPRLA