Gene YPK_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3316 
Symbol 
ID6089486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3636478 
End bp3636891 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content44% 
IMG OID641598393 
Producttransposase IS200-family protein 
Protein accessionYP_001722038 
Protein GI170025533 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGATG AAAAGAGCTT AGCGCACACC CGATGGAACT GTAAATATCA TATAGTTTTT 
GCGCCGAAGT ACCGAAGGCA GGTGTTCTAC AGGGAAAAAC GCAGAGCGAT TGGCAGTATT
TTAAGAAAAC TGTGCGAATG GAAAAACGTG AATATCCTGG AAGCAGAATG CTGTGTGGAT
CACATCCATA TGCTTCTAGA GATCCCGCCC AAGATGAGTG TCTCGGGATT TATGGGGTAC
CTGAAGGGAA AGAGCAGTCT GATGCTTTAT GAGCAGTTTG GCGATTTGAA GTTCAAATAC
CGTAACAGGG AGTTTTGGTG TCGAGGGTAT TACGTTGATA CGGTAGGGAA AAACACGGCC
AGGATACAAG AATACATAAA GCACCAATTG GAAGAGGATA AAATGGGTGA GTAA
 
Protein sequence
MRDEKSLAHT RWNCKYHIVF APKYRRQVFY REKRRAIGSI LRKLCEWKNV NILEAECCVD 
HIHMLLEIPP KMSVSGFMGY LKGKSSLMLY EQFGDLKFKY RNREFWCRGY YVDTVGKNTA
RIQEYIKHQL EEDKMGE