| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3313 |
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| Symbol | |
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| ID | 6090005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3633801 |
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| End bp | 3635591 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641598390 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001722035 |
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| Protein GI | 170025530 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGATT GCTATTGCCA TGGCATGTTA TGGTTCCCAT TAAAATTCAG TTTATTAGCT
TTATTTTCTC TTTCTTGCTC ACCATTAATC GCCACACCTC AAGTGCTAAA TGTGCCAAAC
GCAGGGGCGA TTAGTAATGA AATTAGGCAA ACAACAATAG AGCCATTGAA CGCCCCAGAG
GAAACGGATA TCAAGCTTCC TCAATTAAAT AAGCCCACGC CACCAGAAGG GGGACTCGCG
ACTGAACGCA TTACCCTGCA CAGGGTTAGG TTTGAAGGCG ATGTCTCGTT ATTTCAGCCT
GGTATTACCG CTGACAATAA GGATTTACAG GCGCTGATTA CCCCTTGGTT AAATCGGTCA
CTCACATTTA ACGATTTACA AGCCATGACT TTTGCCGTGA CTCGCTTCTA TCGGAAAAAA
GGGTGGGTCG CAGCTCAGGC AATATTACCA CCACAAACGA TTCGGGACGG TATTATTGTG
GTGCGCGTTA TCGCGGGCCG ATTAGATAAG CCTCAGATAA ATAACCAAAG TAGTTTGAAT
TCTCACTTTA TCACCACGGT GATTGAAAGT AATAGCTGCA GTAAAAAAAA TGGGATCTTT
GGTGATAAAG ATTGTGCCGC GTCTCCCGTT GAATTATCTC GCCTTGAACG CACGGCGCTA
ATTTTGAATG AAATACCGGG CGTTGAGGCT TCTTTGGCAT TAAAACCGGG CACTCAATCT
GGAATGACTC GGATTTATGC TGATGTTACA CCCGGAAAAA AAATGATGGC TTATCTTGCG
GCCGATAATC AGGGAAATGA TTATTCCGGT CATAATCGTT TGTTAACCGG CGGTGTGCTT
AATAACCTCA CTGGCTGGGG AGATCAATTA CGGGCAGATT TAATTTTATC CAGCTCGGCA
GATGTCTTTA ATGGTTTACT GGATTATAAC TTCCCCATTA ATAGCTATGG TACCCGGGCT
GCACTTAATT ATAGCTACCT GGATTATACG TTAACGGGGC CTTTCTCCGT ATTAGATGCA
CGTGGTCACT CTACTACCTG GGGCATCAAT TTACGACATC CATGGATACG CACCTCTGCT
GCACGAATTG ATGTCAATGC GGGTTATTAT CAGGCCAGAA TGCGTGATGC ATTAATCTTG
TTACCAGAAC AAAAACGTAA CCTGAATGCG GGCGAATTTG GTATCAGTGG CACTTTTACT
GCCTTACCCC GTGGGCTCAG TAATTTCAAT TTACTGGGCA CGGCAGGGGA TCTTGCACTG
GATGACGAAT ACAGCCAAAG CATAAATACG CTGACCCATG TGAGCGGTAA TTTTAGCCGC
TTTAATTATC GCGTCGGCCA TGATCAGGGC ATTGGGTCTC ACGTCTCTTT CTTTAATCAA
TTTACCGGTC AAATGGCCAG TAAAAATCTG GATAGTTCGC AAAAATTACT CTTGGGCGGG
CCACTGGCGG TTCGTGCCTA TGGTATTGGC GACGGTTCTG TCGATAAAGG GACGATTTTT
ACCACGGAAT TACGCACACG CTGGCAGCCT GATTTTCCTG ACTGGGCCGG CTATGGGCAT
CAAATTACCG TAGCGGCGTT TTTTGACCAA GGGTGGGGGG CTTATTATCG CCAGCCTATC
GTGGGCCTCT CTGAAAATAA TATCAACATA TCTGGCTTTG GTTCCTATAT CACTTTCGCA
CGCCCGGCAG ATTATTTTTT GAATCTGACC TGGGCACACC GAACCGGTCA GGCAGTGACC
CGTCATCAAG ATAACGATCA GCTCTGGTTA AGTGCTTATA AGATGTTTTA G
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| Protein sequence | MRDCYCHGML WFPLKFSLLA LFSLSCSPLI ATPQVLNVPN AGAISNEIRQ TTIEPLNAPE
ETDIKLPQLN KPTPPEGGLA TERITLHRVR FEGDVSLFQP GITADNKDLQ ALITPWLNRS
LTFNDLQAMT FAVTRFYRKK GWVAAQAILP PQTIRDGIIV VRVIAGRLDK PQINNQSSLN
SHFITTVIES NSCSKKNGIF GDKDCAASPV ELSRLERTAL ILNEIPGVEA SLALKPGTQS
GMTRIYADVT PGKKMMAYLA ADNQGNDYSG HNRLLTGGVL NNLTGWGDQL RADLILSSSA
DVFNGLLDYN FPINSYGTRA ALNYSYLDYT LTGPFSVLDA RGHSTTWGIN LRHPWIRTSA
ARIDVNAGYY QARMRDALIL LPEQKRNLNA GEFGISGTFT ALPRGLSNFN LLGTAGDLAL
DDEYSQSINT LTHVSGNFSR FNYRVGHDQG IGSHVSFFNQ FTGQMASKNL DSSQKLLLGG
PLAVRAYGIG DGSVDKGTIF TTELRTRWQP DFPDWAGYGH QITVAAFFDQ GWGAYYRQPI
VGLSENNINI SGFGSYITFA RPADYFLNLT WAHRTGQAVT RHQDNDQLWL SAYKMF
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