Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3312 |
Symbol | |
ID | 6090024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3627596 |
End bp | 3633760 |
Gene Length | 6165 bp |
Protein Length | 2054 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641598389 |
Product | filamentous haemagglutinin outer membrane protein |
Protein accession | YP_001722034 |
Protein GI | 170025529 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGTA AATTGTACAA ACTTATTTTT TGTCGTCGGC TGGGCTGCTT AATTGCCGTG GGAGAATTTA CCCGATCATA TGGCCGAGCC TTTTCGTCGA AAGACGGTCA AACCGGCAAT AATCAGCGCC GGGCCGTTGG TATCTTAAGC CGTCTGGCGA TGATGACGGG CTTGGCGCTT GGGATATTCC CCTTGCTGGT TCTGGCCCAT CCGGTGTTAC CGGTTAATGG CCATGTTGTC ATCGGGCAAG GGATGTTGGA TCAGCAAAGC AGTACGCTTA CCGTGACACA GCAAACGGAT AAGTTAGCGA TTAATTGGGA CAGTTTTGAT ATTGCGCACG GACACAGTGT CATTTATGCC CAGCCGGGTA GCCAGAGCAT TGCATTGAAT CAGGTGCAGG GGCAGAGCGC ATCGCAAATT TATGGCCGCT TACAGGCAAA TGGTCAGGTC TTCTTGCTTA ACCCGCGCGG GATACTGTTT GGTAAAGAGG CGCAGGTTAA TGTCGGTGGG TTGGTGGCGA GCACGAAATA TATGTCAAAT CCAGAGTTTC TGTCTGGTGA CTACCGCCTG ATCGGGGGGG AGAGTGAAGG CAATATTATT AATCAGGCGA ATTTACGCTC GGCCCCAGGG GGATATATCG CACTGGTGGG TAACCGGATT GATAACCAGC GTTCAGGGTC TATCACCACC CCACAAGGGA ACACTGTGCT GGCAGTCGGT CACAGCGTGA CCTTGAATCT GGACCATGGG AATTTATTAG GGGTACAAAT TCAGGGGGAA ACCGTTGCTG CACTGATTCA AAATGGTGGG TTAATCCAGG CTGATGGCGG AGTGATTCAA CTGACGGCTA AGGGTAAAGA TATGCTGATG GATACGGTGA TTGATAATAC CGGTATCCTG CAAGCTAAAG GGTTGTCAGC GAAAAATGGT GCTATTTATC TTGATGGCGG TGGTGAGGGG GTTGTCAGCC AGATGGGGAC CATCGATGTT AACAATCAGC AGGGGCGTGG AGGACGTGCG GTTGTTGAAG GGAAACGTAT TTATCTGAAT AAGAACAGTA ATATTAAAGC GAAGGGCACT GCAGGCGGTG GCACTGTTTT AGTGGGGGGG GGCTGGCAAG GCAAAGATAA TCAGATCAGA AATGCCACGG CTGTGGTGAT GGATAAAGGC AGTGATATTG ATGTTTCGGC ATCTCGCAAC GGGCCGGGAG GAAGTGCGGT TTTATGGTCT GAGGATTACA CCGGTTTTCA CGGTAATATC CGAGCCAGAG GCGGGCCTCA ATCAGGCGAT GGCGGTCAGG TTGAAACATC CAGCCAACGC AATTTACAAG CTTTTGGGCA AGTGGATGCC AGTGCCGTTC GTGGATCCGC AGGCTATTGG TTATTGGACC CTGCGGAGGT AACAATTGTT AGCAGTGGTG CTGAGAGTGG TGTAATGACT AAAGTGGGTA ATATACCCGC AGAGTTTTTT TCTAGCGCCC ATATTTTTAT TCCAACGGCC AATATTACTC AGATCCTCAA TAGTAGTATT AATACCCAGC TTAATAGTGG CACTAATGTT ACGATAACCA CCAGCAACAG TAGTTTAACG GGGTGCCAAT GGTGCAATAT AACTGTACAA GCCGATATCA CTAAAACGGC GGGAGCCGAT GCGACGCTGA CATTACAGGC TGACGGTAAT ATTGTAGTTA ATAATAATAT TACCGCTGAT GCTGGAAAAT TAAATTTATT AGCAGGAAAT ACCACTGCGG ATTCTGCCAT CACGCTGAAT AATAGCAAGG TTTTATTAAA TGGCGGTGAT TTTTTAGCTA AACATGCCAA TGATAATAAT ACGGCACGTA TTGGCTTACT GGGCGGGCGA TATGATGTTG GCAATTTCAC CTTGGATGGG AATACCGCAT TAGCCTCACA AGTTGGGGTG AATATCAGTA ATGCGGCTAA TATTAGCGTC GCGGGCGAAA CCGTTATCTC CGGTGTGAGC AGTAACAGCC GTGGGCAAGG GTGGCGTGGT ATTGATATAT CAAATAATTC GATCTTAACG GGCGTGGGGA ATATGACTTT CTCGATAGGC TCTAACTCCA ATGTTTCATG GATGGGGTCA TTCACTAATG CAACAATTAC CAGTGATAAG AATATAATAT TCCAAGGGAC GGGGAGTTCG TCAGGTGGAG TGGACTTTGT TAATAGCCGT ATTTTGTCAA AATCTGGCCG TGTTTTATTT GATATAAATG GCAATATTGT TGTTAAGAAT GTTTATGGGC TTCGGGTCAA TAATTCACAG CTCAGTGCTA AGGATGTTAA ATTTGCAGTC AATGTCACTG GAGTTGATGG TTTTTTACTA AGAGATAGTC ATGTTACCGC AACTTCCGGT GATATTAATG CCAATGCTAA TACCATCAAT AAAGGTATTT GGATCTCAGG TAAAACCAAT TTAAACGCCA GTGGTAATGT TAATCTGCAT GGTGTGACGA CTAATTCGGC CTATGCGGGT GCTGATGCAA TAAAGATCAG CGGTAATTCC AGTAGTAACA ATGTCAATAT TACCGCTGGT GGTCATATCT CTCTGATCGC GGTTAATGGA GGGAAAGAGA TTGGAAGCAC TGTTTCTGTA GATTACGCCA ATATAATAGC TAAGAATGGA GACTTTAATT TAAATATTAC TGGGATGAAA GGGAGTCCTT TTAATAACGC TACGATAACT GCCAACAATA TTTCAATGAA TGGCAATATT ACCGCTAATG ATGCGGTGTT GATGACTAAT ACATTCCTCA CGGCTAAAGG CGATATCAAA ACTGATTTAA CCTCTCCTAC TAAAGGTTTA TGGTTTAGGG GAAATGGTGG GATGACCGCG GCTAATAATA TACTCTTGGT TGCTAACAGC ACATCGAGTG GAGAAACAGT GAAAATCAAT GCGTCTTCCT CGAACAAAAT GAATATCACT GCAGGAAAAG ATATATCTAT AATAGCCGGT AATAGTAAAA CAGCTACGGG ACCTAACATT AATATTGAAA ATGTCAATAT AGAAACCAAT AATGGAAACT TTACGACTAA CGGCATAACA AGTACATGGC TGTCGGGAGT GAATGTTAGC GCGAATGGTG TTGATATAAC CTCTAATTCT ACTGGCACCG GTGGCATAGT ATTGGATAAT ACTAATATCC TGACAACAGT AGGTGATATT AATACAATAG TAACCAATTC TTCCGGCAAA GGCATTTGGA TTAAATCTAA CTCAACATTG AATTCTAATA AAGATATCAC CTTGGTTGGA GTATCCGCCG GACAGAATGA AGGGGTCATT ATTCAAGGTT CTTCAGATGC TTCACGTAAC AATATCTCTG CTCAAGGGAA TATCACCTTA ATAGGTAAAA TGGGCAATGG CTCTGGTCAG CGTTCATTAA TCAATTTGGG TAATGTTAGT CTAACATCAA GCGGAAGAAA TATTGATATT AATGGTTCGT CAGCCGGTAC CGGGGATGTT TATTTTACCA ATGTAGAGCT TAATGCTACC GCAGGTAATG TTTCTATTTA TGCTGAAACG AAAACCGCTT TATCGACATC ATTAAATGCC GTATTAAGCT TGGGGGGTAA TAACAGTATC AAAGCTCAAA ATGGATGGCT TATTGGTAAA GCATTTAATA CGACACAAGG GGCGGGTATT GGTTTTAGAG CCAATAGTAG CTTATCTGTT GACGGCAATA TCATTTTGAA AGGCGAGACC GAAGGGGTTG GGGCCACACG CAAAGGGATT GATTTCTATG GCGCGAATAC ACTGAATATT ATTAAAGGTA GCCAATTATC TCTCCTCGGT GAAAATAAAG GGGCTCAAGA TACCGCAGGT GGTAATGGCA TAAGCTATAC CAGCCCAGCT AAATTAACGG TTAATAATAA TGGTTCTTTA AAAATGGAGG GGCGTTCAAC CAACGGTACG GGAATTAACT TCCCAAGCAG CAATAATACG CTGGTATTCA ATGGTGATGG TGACACGCTG ATTAAAGGCA GCAGTGTCGC GGGTACGGGG GCCGCTATTT CCGGTGTTGT TAATAATAGT ACCGGCCCCA TGACGATTGA AGGAATCAGT ACCGATGGTG CCGGTGTTCA CCTTTTCAGT GCAGAACATC GTATTGATCG CATTAATGTC ACAGGGAGTT CAACTCACGC CGAAGGTTTG CGGATCAGTG GTAATGCAGC GATTGTCGAT ACCACATTGA CCGGAAAGTC GATCAATGGC AGTGGTGTGA AGATTGATTC ATTGCCGGGC TCCAGTGTTG TTACCCGTTC CGTCTTGGAT AATGCCACGC TCAATGGCAG CAGTAGCAGT GGGAAAGGGG TGGAAATTAC CAGTGATATC AATGGTATTC ATCACAGTTC GATTAACGGA ACGGCTACTG GCACGGGCTA CGGCATTAAT ATTGGCGAAA ATTTAAACGT TACCGGGACC AGTGAAGCTG ACTTGTTGAT TCTACAAGGT GTGGCGACAA CAGGTACTGG CACCGGAATA AAACTCAATG GTAATAATGA TTTAAGTAAT ACCAGTTTAA ATAGCTCTGC GGTTGATGGT ATCGCTTTGG ATATCACGGG CCCGCTAGCT AACCAAGGGA ATGTGATCCT AAACGGCACG GCTTCTGGTT CGGGGATTGG TGCGCAGGTC AATGGTTCGC TAAGTGATAG TGTGGTTAAC GGTACGTCGA CGAATGGTAT TGGTGTGCAA ATTAATGGAT CGCTTGAAAA CAGCCGCATC AACGGCATTT CGGCCAATGG CAGCGGGGTT AAAGTCGATG GCGATAGCAC GCTGGATAAC GCCACGCTCA ATGGCAACAG CAGCGAAGGC AAGGGCGTGG ATCTGGCGGC CAATCTGTCC GGTAACCATG GCAGTGCGGT GCATGGCGAC ACGGTCAATG GCACCGGCAT CGACGTGGGT AAAGACGTCA CTCTGAGTGG CGGTGGTACG GATGAACCGT TAACGGTCAG TGGTAATGCC AGCGGTGAGA AAGGCACCGG CGTGCAACTG GGCGGCAATA ATACCCTCGA TAACACCACG CTGAGCGGTA ATGCCACTGA CGGCACCGGC GTGGATATCA CCGGCCCGCT GACCAATAGC GGCAATACCA CCCTCGGCGG TAAAGCTGAA AAAGGCGATG GCGTGCAACT CGATGGCGCG ATTACCGGCG GCACGGTCAA CGGCACTTCC GACAGCGGCG CAGGGATTAA AGTGGATGGC GAGACCACGC TGGATAACGC CACGCTTAAT GGCAACAGCA GCGAAGGCAA GGGCGTGGAT CTGGCGGCCA ATCTGTCCGG TAACCATGGC AGTGCGGTGC ATGGCGACAC GGTCAATGGC ACCGGCATCG ACGTGGGTAA AGGCGTCACC CTGAGTGGCG GTGGTACGGA TGAACCGTTA ACGGTCAGCG GTAATGCCAG CGGTGAGAAA GGCACCGGCG TGCAACTGGG CGGCAATAAT ACCCTCGATA ACACCACGCT GAGCGGCAAC GCCACCGATG GCCATGGGGT AGAGATTAAC AGCCGATTAA TCAATAACGG CAATACTACG ATTAATGGCA AAACGTCTGA TGATGGTCAC GGCGTACATA TTAATGGGGC CATCAGTGGC GGAGAAATCA ATGGTCATTC AGACAATAGC CACGGTGTTT TCCTCGATGA AAGTGCGTTA CTTAATGACA TCGTTATCGG AGGAGGGACC GGCTCATATA AACTGCCGGT GTTTATAGCA TTGCCTGAAA CCATCGGTGA GCACGTGACT CTTAATGGTA AACCGATTGA TAAAACCCAG CCAGAAGGCA GTAAGGCACG TGAAGGTGAT AACCTGACAA GGGGTAAATA TACACCTTTG CCACCGGCTA CTGACCCTGA ATTGCCCCCA GCATCAACCG ATGAGGAGAA AAATACAAAA CAGACCTCGA CGCTAACCCC ATCTCAGAAA AGAGAGGATC CAGACATGTT GATAATGGCG CGAAACCATA TCTTGAGTAC CCTTGAAGGG CGTGATTTAT CTTCATCTGT TGTCACTGAA TCGGAGCAAA GTGCGGCGGG CGTTACCGGA ATTATGGTTT GTCTCCCTCT GAGTGAGGCC TCTGAACATG AACCTTGCGA TACGTATATT TTAGACAAGG GACAACCCCA TCTCCCCATG ATGGTCAAGA AGTAA
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Protein sequence | MNSKLYKLIF CRRLGCLIAV GEFTRSYGRA FSSKDGQTGN NQRRAVGILS RLAMMTGLAL GIFPLLVLAH PVLPVNGHVV IGQGMLDQQS STLTVTQQTD KLAINWDSFD IAHGHSVIYA QPGSQSIALN QVQGQSASQI YGRLQANGQV FLLNPRGILF GKEAQVNVGG LVASTKYMSN PEFLSGDYRL IGGESEGNII NQANLRSAPG GYIALVGNRI DNQRSGSITT PQGNTVLAVG HSVTLNLDHG NLLGVQIQGE TVAALIQNGG LIQADGGVIQ LTAKGKDMLM DTVIDNTGIL QAKGLSAKNG AIYLDGGGEG VVSQMGTIDV NNQQGRGGRA VVEGKRIYLN KNSNIKAKGT AGGGTVLVGG GWQGKDNQIR NATAVVMDKG SDIDVSASRN GPGGSAVLWS EDYTGFHGNI RARGGPQSGD GGQVETSSQR NLQAFGQVDA SAVRGSAGYW LLDPAEVTIV SSGAESGVMT KVGNIPAEFF SSAHIFIPTA NITQILNSSI NTQLNSGTNV TITTSNSSLT GCQWCNITVQ ADITKTAGAD ATLTLQADGN IVVNNNITAD AGKLNLLAGN TTADSAITLN NSKVLLNGGD FLAKHANDNN TARIGLLGGR YDVGNFTLDG NTALASQVGV NISNAANISV AGETVISGVS SNSRGQGWRG IDISNNSILT GVGNMTFSIG SNSNVSWMGS FTNATITSDK NIIFQGTGSS SGGVDFVNSR ILSKSGRVLF DINGNIVVKN VYGLRVNNSQ LSAKDVKFAV NVTGVDGFLL RDSHVTATSG DINANANTIN KGIWISGKTN LNASGNVNLH GVTTNSAYAG ADAIKISGNS SSNNVNITAG GHISLIAVNG GKEIGSTVSV DYANIIAKNG DFNLNITGMK GSPFNNATIT ANNISMNGNI TANDAVLMTN TFLTAKGDIK TDLTSPTKGL WFRGNGGMTA ANNILLVANS TSSGETVKIN ASSSNKMNIT AGKDISIIAG NSKTATGPNI NIENVNIETN NGNFTTNGIT STWLSGVNVS ANGVDITSNS TGTGGIVLDN TNILTTVGDI NTIVTNSSGK GIWIKSNSTL NSNKDITLVG VSAGQNEGVI IQGSSDASRN NISAQGNITL IGKMGNGSGQ RSLINLGNVS LTSSGRNIDI NGSSAGTGDV YFTNVELNAT AGNVSIYAET KTALSTSLNA VLSLGGNNSI KAQNGWLIGK AFNTTQGAGI GFRANSSLSV DGNIILKGET EGVGATRKGI DFYGANTLNI IKGSQLSLLG ENKGAQDTAG GNGISYTSPA KLTVNNNGSL KMEGRSTNGT GINFPSSNNT LVFNGDGDTL IKGSSVAGTG AAISGVVNNS TGPMTIEGIS TDGAGVHLFS AEHRIDRINV TGSSTHAEGL RISGNAAIVD TTLTGKSING SGVKIDSLPG SSVVTRSVLD NATLNGSSSS GKGVEITSDI NGIHHSSING TATGTGYGIN IGENLNVTGT SEADLLILQG VATTGTGTGI KLNGNNDLSN TSLNSSAVDG IALDITGPLA NQGNVILNGT ASGSGIGAQV NGSLSDSVVN GTSTNGIGVQ INGSLENSRI NGISANGSGV KVDGDSTLDN ATLNGNSSEG KGVDLAANLS GNHGSAVHGD TVNGTGIDVG KDVTLSGGGT DEPLTVSGNA SGEKGTGVQL GGNNTLDNTT LSGNATDGTG VDITGPLTNS GNTTLGGKAE KGDGVQLDGA ITGGTVNGTS DSGAGIKVDG ETTLDNATLN GNSSEGKGVD LAANLSGNHG SAVHGDTVNG TGIDVGKGVT LSGGGTDEPL TVSGNASGEK GTGVQLGGNN TLDNTTLSGN ATDGHGVEIN SRLINNGNTT INGKTSDDGH GVHINGAISG GEINGHSDNS HGVFLDESAL LNDIVIGGGT GSYKLPVFIA LPETIGEHVT LNGKPIDKTQ PEGSKAREGD NLTRGKYTPL PPATDPELPP ASTDEEKNTK QTSTLTPSQK REDPDMLIMA RNHILSTLEG RDLSSSVVTE SEQSAAGVTG IMVCLPLSEA SEHEPCDTYI LDKGQPHLPM MVKK
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