Gene YPK_3303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3303 
Symbol 
ID6089432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3615846 
End bp3616646 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content50% 
IMG OID641598380 
ProductNa(+)-translocating NADH-quinone reductase subunit C 
Protein accessionYP_001722025 
Protein GI170025520 
COG category[C] Energy production and conversion 
COG ID[COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 
TIGRFAM ID[TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAGTG ATAAACCAAG AAATAATGAC AGCATTGGCA AAACATTGCT GGTGGTGGTG 
ATTTTGTGTT TGGTGTGTTC GGTGGTAGTC GCCGGTGCCG CCGTTGGCTT GAAAGCCAAG
CAGCAGGAAC AGCGTCTACT GGACAAGCAG CGCAACATTT TAGCCGTGGC CGGTTTACTG
CAACCGAGAA TGCCAGCCGA AGAGGTTCAG CAGGCGTTTG CGACACGGAT AGAACCGCGC
TTGTTGGATT TACAAAGTGG CGAATTCCTC AAACAAGATC CCGCTACTTT TGACCGTTCT
CAGGCACTGC GTGATAACCA AATGAGTATT GCATTGACAC CTGCACAAGA TATTGCCGGT
ATCCGTCGCC GGGCTAATGT GGTTGAAATC TATCTGGTGC GTGGTGATGG TGGGCAGATT
AACAAAGTTA TCTTGCCGAT CTATGGATCA GGTCTGTGGT CGATGATGTA CGCCTTTGTT
GCTATTGATA CCGATGGTAA AACCGTGCGA GGAATAACCT ATTACGATCA TGGGGAAACG
CCCGGACTTG GGGGCGAAAT TGAGAACCCT ATCTGGCGTA ATCAATGGAT CGGTAAACGG
TTATTTGATG ACCAAGGGCA GCCCGCTATT CGTATCGTTA AAGGGCGTGC TCCTGCCAAT
GATCCCCATG CAGTTGATGG CCTGTCAGGA GCAACACTGA CCTCCAATGG CGTACAGAAT
AGCTTTAATT TCTGGCTCGG TGAAAACGGC TTTGGCCCGT TCCTGAAAAA AGTGCGCGAA
GGAGCGTTAA AAAATGGCTG A
 
Protein sequence
MASDKPRNND SIGKTLLVVV ILCLVCSVVV AGAAVGLKAK QQEQRLLDKQ RNILAVAGLL 
QPRMPAEEVQ QAFATRIEPR LLDLQSGEFL KQDPATFDRS QALRDNQMSI ALTPAQDIAG
IRRRANVVEI YLVRGDGGQI NKVILPIYGS GLWSMMYAFV AIDTDGKTVR GITYYDHGET
PGLGGEIENP IWRNQWIGKR LFDDQGQPAI RIVKGRAPAN DPHAVDGLSG ATLTSNGVQN
SFNFWLGENG FGPFLKKVRE GALKNG