| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3297 |
|---|
| Symbol | |
|---|
| ID | 6090189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3610887 |
|---|
| End bp | 3611834 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641598374 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_001722019 |
|---|
| Protein GI | 170025514 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAATT ATATAATGAC TACCCTACTT TTATCGTCAA CATTTACAGC TATCGCTCAC
TCGTCCCCTC TTCCAGCACC ACAAATTATT GCACATCGCG CAGGTACTGC CGATGCACCT
GAAAATACCT TTCCTGCCAT TAGTAAAGCA TTGGCAAATG GCGCTGACGC TATCTGGATT
ACATTACAAC TTTCTAAAGA CAATATTCCT GTATTGTATC GCCCCTCTGA TCTTAAGGAA
TTAACCAATG AATCAGGGGC GGTCTCCGCT TATACTGCAA GCCAATTGGC AGAAATCGAT
GCGAGTATTG CCTATAACAA GAAGCATGAT ATCAAGCCCT CAGCAGGCTC TCTCTTCGGT
ATTCCCACAC TTGATGACGT ACTAAAAAAA TATCCAGATA CAATCTTCTA CCTCGATATT
AAATCCCCTG ATGCCGACCC TATTATTTTG GCAAAAGCAC TACAAAAAAC GCTGCTGGCA
ACCTCTAAGG GTGAGAAGAA TCGCCTGATA CGAACCCGCG TTTACTCCAC CAATGACGAT
TATCTGAATG CGTTGGATAC AGTAAATAAA AGCAGTGATC CCTCTCATAA GGTTCAACGC
TTTGAAAGCC GAGATACCAC CAGAACAGTA TTAGCCAATA TCACTATGGA TCATCAATGT
GAGTTACCAA CAGATAATAA AGAACGTTGG TATGGATTGG AACTCCATCG TAAAGTTAAA
GTTGTAGAAA AATACACCTT GGGTGAAGGG CGTTCTAGCG CAATATTAAG TTGGGATAAA
GAGGCCATGG ATTGTTTTCG GAAGAATGCC AATGCACACA TTATTCTTTT CGGTATCAAT
ACCCAAGATG ATTATAAAAA AGCCAAGGAA TTACAGGCAA ATGGTGTCAT GGTGGACTCA
CCAGCACAGT TTAAAGAAAT AATCAGTAAG AGTGAAAATG TGAAGTAA
|
|---|
| Protein sequence | MRNYIMTTLL LSSTFTAIAH SSPLPAPQII AHRAGTADAP ENTFPAISKA LANGADAIWI
TLQLSKDNIP VLYRPSDLKE LTNESGAVSA YTASQLAEID ASIAYNKKHD IKPSAGSLFG
IPTLDDVLKK YPDTIFYLDI KSPDADPIIL AKALQKTLLA TSKGEKNRLI RTRVYSTNDD
YLNALDTVNK SSDPSHKVQR FESRDTTRTV LANITMDHQC ELPTDNKERW YGLELHRKVK
VVEKYTLGEG RSSAILSWDK EAMDCFRKNA NAHIILFGIN TQDDYKKAKE LQANGVMVDS
PAQFKEIISK SENVK
|
|---|
| |