Gene YPK_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3292 
Symbol 
ID6091141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3602547 
End bp3602852 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content38% 
IMG OID641598369 
Productputative holin protein 
Protein accessionYP_001722014 
Protein GI170025509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.175251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCA AAATCCCCGA ACCAGATAGC GTTGTAATTT GGGTTGTTAT TGGTATTTTC 
GCCACATGGG GAGGTGTCGT TAGATTATTA CTACAAGATA CAAAATCTAA AAATCTCCGA
GAGAAGATAT CAGCAATATC GACACAAGTT ATTGTCTCGG GTTTTACCGG CATGCTTGGG
GGATTAATTA GCTTTGAGTA TGGGAGCAGC CCCTATATAT CTTTTGCTAT GGCAGGAATC
TTTGGTTCTT TAGGAGACAC TGGCTTAATG TATATACAAT CCTATTTTAT AAAAAAACGT
CGATAA
 
Protein sequence
MQLKIPEPDS VVIWVVIGIF ATWGGVVRLL LQDTKSKNLR EKISAISTQV IVSGFTGMLG 
GLISFEYGSS PYISFAMAGI FGSLGDTGLM YIQSYFIKKR R