Gene YPK_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3279 
Symbol 
ID6087165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3589743 
End bp3590657 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content50% 
IMG OID641598356 
Productfructokinase 
Protein accessionYP_001722001 
Protein GI170025496 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTG GTATAGATCT GGGTGGTACC AAAATAGAGG TCATAGCATT GGCCAATGAT 
GGGCAGGTGC TTTTCCGTAA ACGGGTTGGT ACTCCACGCC ATGATTATCA AAAAACCATA
CAGGCTATTG CTGACTTAAT CGCTGATGCC GAGCACGCGA CTGGCGAGCA AGGCAGTATC
GGGGTTGGTA TCCCTGGCAC ACTTTCTCCT TTTACCGGCA AAGTGAAAAA CTCAAACTCA
GTATGGTTGA ATGGGCGGGA GTTAGATAAA GATCTCTCGG TGTTTTTGAA CCGCCCGGTG
CGGTTAGCCA ATGATGCGAA CTGTCTGGCC GTTTCTGAGG CAACAGACGG GGCGGGGGCA
GGTAAAAAAT GGGTGTTTGC TGCCGTTATC GGGACGGGGT GTGGCTCGGG TATTGCCATT
GATGGGGGTT CGCATGCTGG CGGTAATGGT ATTGCCGGTG AATGGGGGCA TAACCCGTTA
CCTTGGCAAG ATGAAGAAGA GCGAGAATAT GCACAAGAAG TGACGTGCTA TTGTGGGAAA
AAAGGCTGTA TTGAGACTTT TGTATCGGGT ACGGGTTTTG CCACTGATTA CTTCAGGTTG
AGTGGAAAAC CGCTAAAAGG CCATGAAATT ATTGAGTTGG TTGAGCAGGG TGATGTTATC
GCAGAACAGG CAATGAACAA TTATGAGCGG CGTTTTGCCA AATCGCTGGC CCATGTCATT
AACCTGTTCG ACCCCGATGT TGTGGTACTG GGGGGAGGGA TGAGTAATGT TGACCGCTTG
TATGACACAT TACCTGCGTT AATCAGCCCC TGGGTATTTG GCGGTGAGTG TGAAACGCCT
ATTCTTAAAG CCTTGCATGG TGATTCGAGT GGGGTCAGGG GGGCTGCCTG GTTATGGAAT
ACCCTTCGTC CTTGA
 
Protein sequence
MRIGIDLGGT KIEVIALAND GQVLFRKRVG TPRHDYQKTI QAIADLIADA EHATGEQGSI 
GVGIPGTLSP FTGKVKNSNS VWLNGRELDK DLSVFLNRPV RLANDANCLA VSEATDGAGA
GKKWVFAAVI GTGCGSGIAI DGGSHAGGNG IAGEWGHNPL PWQDEEEREY AQEVTCYCGK
KGCIETFVSG TGFATDYFRL SGKPLKGHEI IELVEQGDVI AEQAMNNYER RFAKSLAHVI
NLFDPDVVVL GGGMSNVDRL YDTLPALISP WVFGGECETP ILKALHGDSS GVRGAAWLWN
TLRP