Gene YPK_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3272 
SymbolproY 
ID6090438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3577965 
End bp3579356 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content46% 
IMG OID641598349 
Productputative proline-specific permease 
Protein accessionYP_001721994 
Protein GI170025489 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAC CAGTTAAAAA TAAGCTTAAA CGTGGCCTGA CGACACGTCA TATTCGTTTT 
ATTGCATTGG GTTCAGCGAT AGGGACTGGC CTATTCTATG GTTCGGCTGA TGCGATAAGA
ATGGCCGGGC CAAGCGTGTT GTTGGCATAC CTGATTGGTG GTGTGGTGGC CTTTGTCATC
ATGCGTGCTT TGGGTGAGAT GTCGGTCAAT AACCCACAAG CCAGCTCTTT CTCTCGTTAT
GCGCAAGATT ATCTTGGGCC GATGGCAGGT TATATCACCG GCTGGACGTA TTGTTTTGAG
ATCTTGATTG TGGCTATTGC TGATGTGACA GCTTTCGGTA TCTATATGGG GCTCTGGTTC
CCAGATGTCG CTCATTGGGT ATGGGTGCTG AGTGTTGTCT TGATCATCGG CGCGGTCAAT
ATGATGAGTG TGAAAGTCTT CGGTGAGCTT GAGTTCTGGT TCTCGTTTTT CAAAGTTGCC
ACCATTATCA TCATGATTTT GGCCGGTATC GGTATCATTG TTTGGGGTAT TGGTAACGGT
GGCCAGCCAA CGGGTATCCA TAATTTATGG ACTAACGGTG GCTTCTTCAG TAATGGCTTT
GTTGGCATGA TCCTGTCATT ACAATTGGTG ATGTTTGCCT ATGGCGGTAT TGAGATTATT
GGTATTACTG CCGGTGAAGC CGAGGATCCG AAAAAATCGA TTCCGAAAGC AATCAACTCA
GTACCATGGC GTATTTTAGT CTTTTACGTC GGGACCCTGT TTGTGATTAT GTCCATTTAC
CCATGGAATC AAGTGGGCAC GAACGGTAGT CCGTTCGTTC TGACCTTCCA GCATATGGGG
ATCACCATTG CTGCCGGTAT TTTGAACTTT GTGGTTATCA CCGCTTCTGT ATCTGCAATT
AACAGCGATG TGTTTGGTGT CGGGCGTATG CTGAATGGGA TGGCAGAACA AGGCCATGCA
CCAAAAGCTT TTACTGCTAT TTCTAAACGC GGTGTGCCGT GGGTCACGGT GCTGGTGATG
ATGTGTGCCA TGCTAATTGC GGTTTATCTG AACTACATCA TGCCGGAAAA TGTTTTCTTG
GTTATTGCGT CATTAGCGAC GTTTGCTACT GTCTGGGTCT GGATCATGAT CCTATTCTCT
CAGATTGCTT TCCGTCGTTC ACTGAGTAAA GATCAGGTTA AAGCACTGGA TTTCCCACTG
CGTGGTGGCA CCTTTACTTC AGTGCTAGCA ATCATTTTCC TGGTATTTAT TATCGGTCTT
ATTGGTTGGT TCCCTACGAC TCGAATCTCA CTGTATGTCG GATTAGTGTG GATCGTGCTG
TTGCTAGTGG GGTATTACTT TAAGGTCAAG TATCAGAAAA AACAGGCTAC GCTGATCAAG
AATGCTGATT AA
 
Protein sequence
MELPVKNKLK RGLTTRHIRF IALGSAIGTG LFYGSADAIR MAGPSVLLAY LIGGVVAFVI 
MRALGEMSVN NPQASSFSRY AQDYLGPMAG YITGWTYCFE ILIVAIADVT AFGIYMGLWF
PDVAHWVWVL SVVLIIGAVN MMSVKVFGEL EFWFSFFKVA TIIIMILAGI GIIVWGIGNG
GQPTGIHNLW TNGGFFSNGF VGMILSLQLV MFAYGGIEII GITAGEAEDP KKSIPKAINS
VPWRILVFYV GTLFVIMSIY PWNQVGTNGS PFVLTFQHMG ITIAAGILNF VVITASVSAI
NSDVFGVGRM LNGMAEQGHA PKAFTAISKR GVPWVTVLVM MCAMLIAVYL NYIMPENVFL
VIASLATFAT VWVWIMILFS QIAFRRSLSK DQVKALDFPL RGGTFTSVLA IIFLVFIIGL
IGWFPTTRIS LYVGLVWIVL LLVGYYFKVK YQKKQATLIK NAD