Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3272 |
Symbol | proY |
ID | 6090438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3577965 |
End bp | 3579356 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641598349 |
Product | putative proline-specific permease |
Protein accession | YP_001721994 |
Protein GI | 170025489 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAC CAGTTAAAAA TAAGCTTAAA CGTGGCCTGA CGACACGTCA TATTCGTTTT ATTGCATTGG GTTCAGCGAT AGGGACTGGC CTATTCTATG GTTCGGCTGA TGCGATAAGA ATGGCCGGGC CAAGCGTGTT GTTGGCATAC CTGATTGGTG GTGTGGTGGC CTTTGTCATC ATGCGTGCTT TGGGTGAGAT GTCGGTCAAT AACCCACAAG CCAGCTCTTT CTCTCGTTAT GCGCAAGATT ATCTTGGGCC GATGGCAGGT TATATCACCG GCTGGACGTA TTGTTTTGAG ATCTTGATTG TGGCTATTGC TGATGTGACA GCTTTCGGTA TCTATATGGG GCTCTGGTTC CCAGATGTCG CTCATTGGGT ATGGGTGCTG AGTGTTGTCT TGATCATCGG CGCGGTCAAT ATGATGAGTG TGAAAGTCTT CGGTGAGCTT GAGTTCTGGT TCTCGTTTTT CAAAGTTGCC ACCATTATCA TCATGATTTT GGCCGGTATC GGTATCATTG TTTGGGGTAT TGGTAACGGT GGCCAGCCAA CGGGTATCCA TAATTTATGG ACTAACGGTG GCTTCTTCAG TAATGGCTTT GTTGGCATGA TCCTGTCATT ACAATTGGTG ATGTTTGCCT ATGGCGGTAT TGAGATTATT GGTATTACTG CCGGTGAAGC CGAGGATCCG AAAAAATCGA TTCCGAAAGC AATCAACTCA GTACCATGGC GTATTTTAGT CTTTTACGTC GGGACCCTGT TTGTGATTAT GTCCATTTAC CCATGGAATC AAGTGGGCAC GAACGGTAGT CCGTTCGTTC TGACCTTCCA GCATATGGGG ATCACCATTG CTGCCGGTAT TTTGAACTTT GTGGTTATCA CCGCTTCTGT ATCTGCAATT AACAGCGATG TGTTTGGTGT CGGGCGTATG CTGAATGGGA TGGCAGAACA AGGCCATGCA CCAAAAGCTT TTACTGCTAT TTCTAAACGC GGTGTGCCGT GGGTCACGGT GCTGGTGATG ATGTGTGCCA TGCTAATTGC GGTTTATCTG AACTACATCA TGCCGGAAAA TGTTTTCTTG GTTATTGCGT CATTAGCGAC GTTTGCTACT GTCTGGGTCT GGATCATGAT CCTATTCTCT CAGATTGCTT TCCGTCGTTC ACTGAGTAAA GATCAGGTTA AAGCACTGGA TTTCCCACTG CGTGGTGGCA CCTTTACTTC AGTGCTAGCA ATCATTTTCC TGGTATTTAT TATCGGTCTT ATTGGTTGGT TCCCTACGAC TCGAATCTCA CTGTATGTCG GATTAGTGTG GATCGTGCTG TTGCTAGTGG GGTATTACTT TAAGGTCAAG TATCAGAAAA AACAGGCTAC GCTGATCAAG AATGCTGATT AA
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Protein sequence | MELPVKNKLK RGLTTRHIRF IALGSAIGTG LFYGSADAIR MAGPSVLLAY LIGGVVAFVI MRALGEMSVN NPQASSFSRY AQDYLGPMAG YITGWTYCFE ILIVAIADVT AFGIYMGLWF PDVAHWVWVL SVVLIIGAVN MMSVKVFGEL EFWFSFFKVA TIIIMILAGI GIIVWGIGNG GQPTGIHNLW TNGGFFSNGF VGMILSLQLV MFAYGGIEII GITAGEAEDP KKSIPKAINS VPWRILVFYV GTLFVIMSIY PWNQVGTNGS PFVLTFQHMG ITIAAGILNF VVITASVSAI NSDVFGVGRM LNGMAEQGHA PKAFTAISKR GVPWVTVLVM MCAMLIAVYL NYIMPENVFL VIASLATFAT VWVWIMILFS QIAFRRSLSK DQVKALDFPL RGGTFTSVLA IIFLVFIIGL IGWFPTTRIS LYVGLVWIVL LLVGYYFKVK YQKKQATLIK NAD
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