Gene YPK_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3263 
SymbolyajC 
ID6090980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3567954 
End bp3568289 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content44% 
IMG OID641598340 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001721985 
Protein GI170025480 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000145315 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTT TCATTTCTGA TGCTGTCGCA TCTGCAGGGG CTCCGGCTCA AGGAAACAGC 
ATGACCTCCA TGCTGATCAT GCTGGTAGTA TTCGGTCTGA TTTTCTACTT TATGATCCTG
CGTCCACAAC AAAAACGTGC CAAAGAACAT AAAAAACTGA TGGATTCTAT TGGCAAAGGT
GATGAAGTAT TAACATCGGG TGGTTTTATT GGTCGTGTTA CTAAAGTTGC GGAAACAGGC
TATGTTGTTA TCGCGCTGAA TGACACTACC GAAGTGATGA TCAAGCGTGA CTTCGTGGCT
GCCGTGTTAC CGAAAGGTAC AATGAAGGCT CTGTAA
 
Protein sequence
MSFFISDAVA SAGAPAQGNS MTSMLIMLVV FGLIFYFMIL RPQQKRAKEH KKLMDSIGKG 
DEVLTSGGFI GRVTKVAETG YVVIALNDTT EVMIKRDFVA AVLPKGTMKA L