| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3261 |
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| Symbol | secF |
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| ID | 6090958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3565100 |
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| End bp | 3566068 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641598338 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001721983 |
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| Protein GI | 170025478 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.578435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACAGG ATTATACTGT TGAACAACTA AACTATGGCC GTAAAGTCTA TGACTTTATG
CGCTGGGATT ACGTTGCTTT CGGCGTTTCA CTGTTGTTGT TAGTCGCATC CATTGTGGTG
ATGTCGACTA AGGGATTCAA CTGGGGTCTG GATTTCACCG GTGGTACGGT GATTGAAATT
AATCTGGAAA ACCCTGCGGA TCTTGACCAA CTCCGTGACA CGTTGCAAAA CGCGGGTTTT
GAATCGCCGA TACTGCAAAA CTTTGGTAGC TCTCGTGATG TCATGGTACG TATGCCACCT
GCAACCGGCA CTGCCGGCCA GGAGCTGGGT AACAAAATCA TCTCGGTTAT CAATGAATCT
GTTGATAAGA ATGCATCAGT AAAGCGTATC GAATTCGTTG GGCCTAGTGT GGGCAGTGAT
TTAGCCCAAG CCGGTGCTCT GGCGCTTTTG GTCGCGTTAC TGTCTATTCT GGTTTACGTG
GGTTTCCGTT TTGAATGGCG TCTGGCATTG GGGGCCGTTA TCTCATTGGC CCATGACGTG
GTCATTACCA TGGGGATCTT GTCGTTGTTC CATATTGAGA TTGACCTGAC GATCATTGCT
TCATTGATGT CGGTTATTGG TTACTCTCTG AACGATAGTA TCGTGGTATC AGACCGTATT
CGTGAGAACT TCCGCAAAAT TCGTCGTGGA ACGCCTTACG AAATCATGAA CGTATCTCTG
ACACAAACCT TAAGTCGTAC GATTATGACT TCTGCGACGA CTCTGATGGT TGTGTTGATG
CTGTTTATCT TCGGTGGTGC GATGCTGCAA GGCTTCTCAT TAACGATGCT GATCGGTGTT
ACTATCGGTA CCGTTTCATC TATCTACGTG GCGTCCGCGC TGGCGCTGAA GTTAGGGATG
AAACGTGAAC ACATGTTGCA GCCGAAGGTT GAGAAAGAAG GTGCTGACCA ACCTTCAATA
CTGCCGTGA
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| Protein sequence | MAQDYTVEQL NYGRKVYDFM RWDYVAFGVS LLLLVASIVV MSTKGFNWGL DFTGGTVIEI
NLENPADLDQ LRDTLQNAGF ESPILQNFGS SRDVMVRMPP ATGTAGQELG NKIISVINES
VDKNASVKRI EFVGPSVGSD LAQAGALALL VALLSILVYV GFRFEWRLAL GAVISLAHDV
VITMGILSLF HIEIDLTIIA SLMSVIGYSL NDSIVVSDRI RENFRKIRRG TPYEIMNVSL
TQTLSRTIMT SATTLMVVLM LFIFGGAMLQ GFSLTMLIGV TIGTVSSIYV ASALALKLGM
KREHMLQPKV EKEGADQPSI LP
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