Gene YPK_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3259 
SymbolnrdR 
ID6088814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp3562996 
End bp3563445 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID641598336 
Producttranscriptional regulator NrdR 
Protein accessionYP_001721981 
Protein GI170025476 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.231243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC CGTTTTGTGC CGCTGTGGAT ACTAAAGTGA TTGACTCCCG TCTGGTGAGT 
GATGGCTCAC AAGTCCGCCG CCGCCGCCAG TGTTTAGATT GTAATGAGCG TTTTACCACT 
TTTGAAGTGG CTGAGCTGGT GTTACCACGG GTCATAAAAA GTGACGAGGT ACGCGAACCG 
TTCAATGAAG AGAAATTACG ACGCGGTATG TTGAAAGCGT TAGAAAAGCG GCCAGTTAGC 
TCAGATGATG TTGAAACAGC GATAAGCCAC ATAAAATCTC AATTACGCGC CACCGGTGAG 
CGGGAAGTGC CGACCAAAAT GGTGGGTAAT TTAGTGATGG AAGCGCTGAA ACGTTTGGAT 
AAAGTCGCTT ATATCCGCTT TGCCTCGGTT TATCGCAGTT TCGAAGATGT CCGCGAATTT 
GGCGAAGAAA TTGCGCGCTT GCAGGATTAA
 
Protein sequence
MHCPFCAAVD TKVIDSRLVS DGSQVRRRRQ CLDCNERFTT FEVAELVLPR VIKSDEVREP 
FNEEKLRRGM LKALEKRPVS SDDVETAISH IKSQLRATGE REVPTKMVGN LVMEALKRLD 
KVAYIRFASV YRSFEDVREF GEEIARLQD