Gene YPK_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3256 
SymbolnusB 
ID6087399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3560712 
End bp3561128 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID641598333 
Producttranscription antitermination protein NusB 
Protein accessionYP_001721978 
Protein GI170025473 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.05376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACCTG CTGCTCGTCG CCGCGCTCGT GAGTGCGCTG TTCAAGCGCT TTACTCTTGG 
CAGTTGTCTA AAAACGACAT CGCTGATGTT GAATTACAGT TCCTGTCGGA GCAGGATGTC
AAAGATGTAG ACATCGCCTA TTTTCGCGAA TTGCTGTCAG GGGTTGCGGT TAATGCAGCA
TCTCTGGATG CATTAATGGC ACCTTTTCTT TCCCGTCAGC TCGAAGAATT AGGTCAGGTT
GAACGTGCTG TTTTGCGTAT TGCTCTGTTT GAACTGAGCA AACGTGATGA TGTCCCTTAT
AAGGTGGCAA TCAATGAAGC GATCGAACTG GCCAAAACTT TCGGCGCGGA AGATAGCCAT
AAGTTCGTTA ACGGAGTGCT GGATAAAGTC GCTCCGACGG TACGTAAGAG AAAATAA
 
Protein sequence
MKPAARRRAR ECAVQALYSW QLSKNDIADV ELQFLSEQDV KDVDIAYFRE LLSGVAVNAA 
SLDALMAPFL SRQLEELGQV ERAVLRIALF ELSKRDDVPY KVAINEAIEL AKTFGAEDSH
KFVNGVLDKV APTVRKRK