Gene YPK_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3254 
Symbol 
ID6087546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3559004 
End bp3559489 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID641598331 
Productphosphatidylglycerophosphatase A 
Protein accessionYP_001721976 
Protein GI170025471 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.021985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAG CCAAGCGCCG TCTACGGTTG AGTAATCCCT GGCACTTGCT GGCGACCGGT 
TTTGGCAGTG GGCTATCACC ATGGGCACCG GGTACTATGG GGTCAATTGC CGCGATCCCA
TTCTGGCTGT TACTGATTCA GTTGCCATGG CAGCTTTACG TCTTGTTGGT GATGTTCAGT
ATCTGTATTG GTATCTATAT TTGCCACCGT ACAGCCAAAG ATATGCAAGT TCATGATCAC
GGTAGTATTG TGTGGGATGA ATTTGTTGGG ATGTGGATAA CCTTGATGGC ATTGCCGGTA
AATAGCTGGC AATGGGTTGT GGCAGGGTTT ATCGCATTCC GTATTTTTGA TATCTGGAAG
CCTTGGCCGA TCCGTTGGTT TGACCGTAAC ATTCATGGCG GAACGGGGAT AATGGTTGAT
GATATTATTG CCGGGGTTGT TGCTGCTGCG GTTATCTTTG TGATTGGGCA CTATTGGCCG
CTGTAA
 
Protein sequence
MDEAKRRLRL SNPWHLLATG FGSGLSPWAP GTMGSIAAIP FWLLLIQLPW QLYVLLVMFS 
ICIGIYICHR TAKDMQVHDH GSIVWDEFVG MWITLMALPV NSWQWVVAGF IAFRIFDIWK
PWPIRWFDRN IHGGTGIMVD DIIAGVVAAA VIFVIGHYWP L